Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1503 ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGAAGGGTGTGGCTTGGGACATTTGGAACAGCTGAAGAAGCAGCAAGAGCATATGATGAGGCAGCCATATTGATGAGTGGCAGAAACGCGAAAACAAACTTCCCTGCAGTTGTGGCCTCATCTTCGTCTTCTTCTGTTCTGAATGAAAAACTGAAGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACATGCCTAAGGCTTGACACTGAGAATTCCCACCTGGGAGTGTGGCAGAAGCGACCAGGGCCTCGTTCTGAATCAAACTGGATTATGACTGTTCAGTTGGAACCGAAGAAGAATATTAATATTGAAGGACAATCATCATCAGTGGCAGCAGAGAAGAGCAACAATAACACTAATGAGTTGGATGAGGAGCAGAAGATTGCATTGCAGATGATAGAAGAGCTTCTCAATAGGAACTGA 507 0.4596 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFGTAEEAARAYDEAAILMSGRNAKTNFPAVVASSSSSSVLNEKLKKCCKSPSPSLTCLRLDTENSHLGVWQKRPGPRSESNWIMTVQLEPKKNINIEGQSSSVAAEKSNNNTNELDEEQKIALQMIEELLNRN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1503 168 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 168 - -
Aed1g1503 168 MobiDBLite consensus disorder prediction 130 149 - -
Aed1g1503 168 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Aed1g1503 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 168 - -
Aed1g1503 168 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Aed1g1503 168 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1503 Aed-Chr1 13529641 13530317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1503 1 168 AP2-EREBP Transcription Factor Family AT1G15360 57.789 1.45e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed1g1503 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1503 - - gmx:100778381 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1503 1 13529641 13530317 Aed1g1503 1 13529641 13530317 ECH