Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1458 ATGGATGATGCACCATATGGTATCATCAGTCACACTCACCACCCAGGTTATGATTATCACAATTCTCCATATTCCCCCCCTGTCGATGTTGATAATGATGAACAAGAGCAGTTTGAATTACAAGGGGATGATCATGTTCATCAAAGTAACAACCTTCAGCTTCCCCAAAAGGATGCTGATGTAGAAGAAGATGGCATGGATGGTGGTGGTGATGAAGAGGAGGAGGTGGTGGAGGTGGAAGAAAATAAGCAGATTGATTATTATGCCACTAAGAGTGAAGATGATGAGTTAGAGTGGCACCCAAAAAAGCAAAAACTTAAGAGTTTGATTTCGACCTATGAACTTGCGCCTCGATTGCCAGCAGCACCATCAGTTGCAGCTACAGCTCCCTCGGTTCCTAAACCGTCTTCTGGGGGTAGGAATTCACTTACTGACTGGACTGAGCAAGAGACATTTGTTCTTCTTGATGCATGGGGTGATAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATGTGAGGAATGGCAACAAGTTGCAAAAATGGTATCACATGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGAAACCGTCTGGATACATTGAAGAAAAAATACAAGAAGGAGAAGCCTAAATTTCCAGATAGTGATGGTGGTGGTGCTTGCAAATGGGTTTATTTTAAAAGAATGGATGAGCTAATGTCTTCTCCTCCGCAACAAGCTGCTCTCTCTTGTGGTTTAGACTCAGGAGAGTATGTTCTTATGAACTATGCAAATGATGGGTTGGATGAAATGAGGGATAGTTCTGAGAATACAGAATCTACTGGTGAAGAAGGTTCTGATGGACCTCAAGCAAAGAAAAGAAAGAAGAGAAAGGGCAGTGGCAGTGGCGAAGCTTCTTCCTTCAGGTTACTCGCTGATTCCATTCAGAAATTCAGTAAGATATATGAGAAGATAGAAAATAGTAAAAGGCAGCAGATGATGGAACTTGAAAAGATGAGGATGGATTTCCATAAAGAGTTGGAAACACAGAAGAGGCGGATTTTAGAGAATCTGCAGTGTGAGATTTCAAAACTAGAGCAGAGAAATGATGAGAACGATGATTCTGCTGAGAATGGTACTTGA 1125 0.416 MDDAPYGIISHTHHPGYDYHNSPYSPPVDVDNDEQEQFELQGDDHVHQSNNLQLPQKDADVEEDGMDGGGDEEEEVVEVEENKQIDYYATKSEDDELEWHPKKQKLKSLISTYELAPRLPAAPSVAATAPSVPKPSSGGRNSLTDWTEQETFVLLDAWGDRFLQHGRKSLRCEEWQQVAKMVSHVSKIERTDTQCRNRLDTLKKKYKKEKPKFPDSDGGGACKWVYFKRMDELMSSPPQQAALSCGLDSGEYVLMNYANDGLDEMRDSSENTESTGEEGSDGPQAKKRKKRKGSGSGEASSFRLLADSIQKFSKIYEKIENSKRQQMMELEKMRMDFHKELETQKRRILENLQCEISKLEQRNDENDDSAENGT 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1458 374 Coils Coil 316 369 - -
Aed1g1458 374 Gene3D - 146 208 - -
Aed1g1458 374 CDD SANT 146 198 IPR001005 -
Aed1g1458 374 ProSiteProfiles Myb-like domain profile. 146 203 IPR001005 -
Aed1g1458 374 PANTHER OS01G0718900 PROTEIN 31 372 - -
Aed1g1458 374 MobiDBLite consensus disorder prediction 263 299 - -
Aed1g1458 374 Pfam Myb/SANT-like DNA-binding domain 145 233 IPR044822 -
Aed1g1458 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 372 IPR044823 -
Aed1g1458 374 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1458 Aed-Chr1 13227072 13228196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1458 286 372 Trihelix Transcription Factor Family AT3G14180 39.080 1.53e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed1g1458 Myb_DNA-bind_4 2.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1458 - - gmx:100779629 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1458 1 13227072 13228196 Aed1g1458 1 13227072 13228196 ECH