Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1456 ATGAGCGTGGTTGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTCGCAAGACAAAGGGGGATTGACGTTGTGCTCAATGATGAGTCAAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCTGGGTCTGCCTCTACTATGATGAATCCAAAGAATTCCATCTCACAATTAAAGAGGTTAATTGGCAGACAATTTGCTGATCCGGAATTGCAGCAAGATCTGAAAACGTTTCCTTTTGTTGTCACTGAAGGACCTGATGGATATCCATTAATTCAAGCACGTTACTTGGGTGAAGCTAAAACATTTACACCTACCCAAGTATTTGGAATGATGTTATCAAACCTTAAAGAAATAGCCGAGAAAAATCTGAATGCTGCTGTTGTTGATTGCTGCATTGGAATTCCACTTTATTTTACTGATCTTCAGAGGAGGGCAGTCTTGGATGCTGCCACTATTGCGGGTTTGCATCCACTCCGTCTGTTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATTTATAAGACCGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATGTTGGACATGCTAGCATGCAAGTGTGCATTGCCGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAATCATACGATAGGTCCCTTGGTGGGAGGGACTTTGACGAGGTTCTGTTCAATCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATTGATGTATTCCAAAATGCCAGGGCTTGCCTGAGGTTGAGGGCTGCATGTGAGAAGCTGAAGAAGATGCTTAGTGCTAATCCAGAGGCACCTCTGAACATTGAGTGCTTAATGGATGAGAAGGATGTCAGAGGCTTTATCAAGCGTGATGAATTTGAGCAACTAAGTCTTCCAATTTTGGAACGGGTGAAGGGACCTTTGGAAAAGGCACTTGCAGAGGCAGGTCTTACAGTTGAGGATATACACATGGTTGAGGTGGTTGGTTCTGGATCTCGAGTACCAGCTATAAATAAAATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAGTGTGCAATTCTCAGTCCAACTTTTAAAGTACGGGAGTTTCAGATCAACGAAAGCTTTCCCTTCTCAATTTCTCTCTCGTGGAAAGGTTCAAGTTCTGATGCACAGGAAAGTGGATCAGATAATAAACAAAGTACCCTTATTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTGACCATCTACAGGTCAGGAACCTTTCCTATTGATGTTCAATATGATGATGCGAGTGGTTTGCAGGCACCTGCAAAGATCAGCACATATACTATTGGACCTTTCCAATCTACAAAAACTGACAAGGCAAAAGTTAAAGTGAAAGTTCGGTTGAATCTGCACGGAATTGTATCTGTCGAATCTGCCACTCTACTGGAAGAGGAAGAAATTGAAGTTCCAGTTTCCAAAGAATCAGCAGGAGGAAATACCAAGATGGAAACTGATGAAGCTCCTGCCCCTGCTGATGCTACTGCACCTCCTAGCACCAATGACAATGATGTTAACATGCAAGATGCTAATACCAAAGCAACTGCTGATGCCCCTGGAGCTGAAAATGGTGCCCCTGAGGAAGGAGATAAGCCTGTGCAAATGGATACCGATGCCAAGGTTGAGGCTCCAAAGAAAAAAGTTAAGAAAATAAGCATTCCTGTGGTAGAGTTAGTTTATGGAGCAATGGCAGCCGGGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTACAAGATAGGGTGATGGAGGAAACAAAAGATAAGAAAAATGCCGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGATTCAGAGAGGGAAGCATTTACTGCTAAACTTCAGGAGGTTGAAGACTGGCTATATGAGGATGGCGAAGATGAAACTAAAGGCGTATACATTGCCAAGCTAGAAGAGCTCAAGAAGCAAGGGGATCCAATTGAAGAGCGTTACAAAGAATACACAGAGAGGGGTCCAGTAATTGATCAACTCCGCTATTGTATAAACAGTTATAGAGATGCTGCAATGTCAATTGATCCCAAATTTGATCACATTGACATCAGTGAGAAACAGAAGGTGTTAAATGAATGTGCGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACAGCAACAGGACTCGCTTCCAAAATATGCCACCCCTGTACTTCTGTCAGCCGACATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCAATTATGACGAAACCAAAGCCACCGCCACCCAAGCCAGCTACTCCAGAAGCACCAGCAACCCCACCTCCTCAGGGTGGTGAGCAGCCTCAACAGCAGCAACAACAATCACCACCTCAGGATAATCCTAATGTTAACACTAATGAAAATGCTGGGGACAATGCCAATCCAGCCCCGCCACCAGCATCTGCTGAACCAATGGAGACTGACAAACCAGAGAACACAGGCTCTGCTTAA 2601 0.4383 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGSASTMMNPKNSISQLKRLIGRQFADPELQQDLKTFPFVVTEGPDGYPLIQARYLGEAKTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVEDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQINESFPFSISLSWKGSSSDAQESGSDNKQSTLIFPKGNPIPSVKALTIYRSGTFPIDVQYDDASGLQAPAKISTYTIGPFQSTKTDKAKVKVKVRLNLHGIVSVESATLLEEEEIEVPVSKESAGGNTKMETDEAPAPADATAPPSTNDNDVNMQDANTKATADAPGAENGAPEEGDKPVQMDTDAKVEAPKKKVKKISIPVVELVYGAMAAGDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYTERGPVIDQLRYCINSYRDAAMSIDPKFDHIDISEKQKVLNECAEAENWLREKKQQQDSLPKYATPVLLSADIRKKAEAVDRFCKPIMTKPKPPPPKPATPEAPATPPPQGGEQPQQQQQQSPPQDNPNVNTNENAGDNANPAPPPASAEPMETDKPENTGSA 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1456 866 PANTHER HSC70CB, ISOFORM G-RELATED 1 865 - -
Aed1g1456 866 MobiDBLite consensus disorder prediction 791 814 - -
Aed1g1456 866 CDD HSPA4_like_NDB 2 381 - -
Aed1g1456 866 Gene3D - 601 708 IPR029048 -
Aed1g1456 866 Gene3D - 186 360 - -
Aed1g1456 866 Gene3D - 38 113 - -
Aed1g1456 866 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Aed1g1456 866 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 597 IPR029047 -
Aed1g1456 866 Pfam Hsp70 protein 3 701 IPR013126 GO:0005524|GO:0140662
Aed1g1456 866 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 865 - -
Aed1g1456 866 PRINTS 70kDa heat shock protein signature 140 160 - -
Aed1g1456 866 PRINTS 70kDa heat shock protein signature 2 15 - -
Aed1g1456 866 PRINTS 70kDa heat shock protein signature 30 42 - -
Aed1g1456 866 PRINTS 70kDa heat shock protein signature 363 383 - -
Aed1g1456 866 PRINTS 70kDa heat shock protein signature 332 348 - -
Aed1g1456 866 Coils Coil 739 759 - -
Aed1g1456 866 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 603 700 IPR029048 -
Aed1g1456 866 MobiDBLite consensus disorder prediction 505 544 - -
Aed1g1456 866 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Aed1g1456 866 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 799 IPR029048 -
Aed1g1456 866 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 633 IPR029047 -
Aed1g1456 866 MobiDBLite consensus disorder prediction 787 866 - -
Aed1g1456 866 Gene3D - 709 794 IPR029048 -
Aed1g1456 866 MobiDBLite consensus disorder prediction 551 570 - -
Aed1g1456 866 Coils Coil 686 706 - -
Aed1g1456 866 MobiDBLite consensus disorder prediction 815 842 - -
Aed1g1456 866 Gene3D Actin; Chain A, domain 4 230 313 - -
Aed1g1456 866 Gene3D - 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1456 Aed-Chr1 13216504 13221734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1456 4 434 Calmodulin-binding Proteins AT1G16030 35.023 5.36e-86 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1456 K09489 - gmx:100778196 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1456 1 13216504 13221734 Aed1g1456 1 13216504 13221734 ECH
Aed1g1456 1 13216504 13221734 Aed2g0177 2 1193436 1199056 PCT