Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g1456 | ATGAGCGTGGTTGGATTTGATTTTGGTAATGAGAGCTGCATTGTTGCTGTCGCAAGACAAAGGGGGATTGACGTTGTGCTCAATGATGAGTCAAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAGCGGTTCCTTGGGACAGCTGGGTCTGCCTCTACTATGATGAATCCAAAGAATTCCATCTCACAATTAAAGAGGTTAATTGGCAGACAATTTGCTGATCCGGAATTGCAGCAAGATCTGAAAACGTTTCCTTTTGTTGTCACTGAAGGACCTGATGGATATCCATTAATTCAAGCACGTTACTTGGGTGAAGCTAAAACATTTACACCTACCCAAGTATTTGGAATGATGTTATCAAACCTTAAAGAAATAGCCGAGAAAAATCTGAATGCTGCTGTTGTTGATTGCTGCATTGGAATTCCACTTTATTTTACTGATCTTCAGAGGAGGGCAGTCTTGGATGCTGCCACTATTGCGGGTTTGCATCCACTCCGTCTGTTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATTTATAAGACCGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATGTTGGACATGCTAGCATGCAAGTGTGCATTGCCGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAATCATACGATAGGTCCCTTGGTGGGAGGGACTTTGACGAGGTTCTGTTCAATCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATTGATGTATTCCAAAATGCCAGGGCTTGCCTGAGGTTGAGGGCTGCATGTGAGAAGCTGAAGAAGATGCTTAGTGCTAATCCAGAGGCACCTCTGAACATTGAGTGCTTAATGGATGAGAAGGATGTCAGAGGCTTTATCAAGCGTGATGAATTTGAGCAACTAAGTCTTCCAATTTTGGAACGGGTGAAGGGACCTTTGGAAAAGGCACTTGCAGAGGCAGGTCTTACAGTTGAGGATATACACATGGTTGAGGTGGTTGGTTCTGGATCTCGAGTACCAGCTATAAATAAAATATTGACAGAGTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAGTGTGCAATTCTCAGTCCAACTTTTAAAGTACGGGAGTTTCAGATCAACGAAAGCTTTCCCTTCTCAATTTCTCTCTCGTGGAAAGGTTCAAGTTCTGATGCACAGGAAAGTGGATCAGATAATAAACAAAGTACCCTTATTTTCCCCAAGGGAAATCCCATACCAAGTGTCAAGGCACTGACCATCTACAGGTCAGGAACCTTTCCTATTGATGTTCAATATGATGATGCGAGTGGTTTGCAGGCACCTGCAAAGATCAGCACATATACTATTGGACCTTTCCAATCTACAAAAACTGACAAGGCAAAAGTTAAAGTGAAAGTTCGGTTGAATCTGCACGGAATTGTATCTGTCGAATCTGCCACTCTACTGGAAGAGGAAGAAATTGAAGTTCCAGTTTCCAAAGAATCAGCAGGAGGAAATACCAAGATGGAAACTGATGAAGCTCCTGCCCCTGCTGATGCTACTGCACCTCCTAGCACCAATGACAATGATGTTAACATGCAAGATGCTAATACCAAAGCAACTGCTGATGCCCCTGGAGCTGAAAATGGTGCCCCTGAGGAAGGAGATAAGCCTGTGCAAATGGATACCGATGCCAAGGTTGAGGCTCCAAAGAAAAAAGTTAAGAAAATAAGCATTCCTGTGGTAGAGTTAGTTTATGGAGCAATGGCAGCCGGGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTACAAGATAGGGTGATGGAGGAAACAAAAGATAAGAAAAATGCCGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGATTCAGAGAGGGAAGCATTTACTGCTAAACTTCAGGAGGTTGAAGACTGGCTATATGAGGATGGCGAAGATGAAACTAAAGGCGTATACATTGCCAAGCTAGAAGAGCTCAAGAAGCAAGGGGATCCAATTGAAGAGCGTTACAAAGAATACACAGAGAGGGGTCCAGTAATTGATCAACTCCGCTATTGTATAAACAGTTATAGAGATGCTGCAATGTCAATTGATCCCAAATTTGATCACATTGACATCAGTGAGAAACAGAAGGTGTTAAATGAATGTGCGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACAGCAACAGGACTCGCTTCCAAAATATGCCACCCCTGTACTTCTGTCAGCCGACATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCAATTATGACGAAACCAAAGCCACCGCCACCCAAGCCAGCTACTCCAGAAGCACCAGCAACCCCACCTCCTCAGGGTGGTGAGCAGCCTCAACAGCAGCAACAACAATCACCACCTCAGGATAATCCTAATGTTAACACTAATGAAAATGCTGGGGACAATGCCAATCCAGCCCCGCCACCAGCATCTGCTGAACCAATGGAGACTGACAAACCAGAGAACACAGGCTCTGCTTAA | 2601 | 0.4383 | MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGSASTMMNPKNSISQLKRLIGRQFADPELQQDLKTFPFVVTEGPDGYPLIQARYLGEAKTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVEDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQINESFPFSISLSWKGSSSDAQESGSDNKQSTLIFPKGNPIPSVKALTIYRSGTFPIDVQYDDASGLQAPAKISTYTIGPFQSTKTDKAKVKVKVRLNLHGIVSVESATLLEEEEIEVPVSKESAGGNTKMETDEAPAPADATAPPSTNDNDVNMQDANTKATADAPGAENGAPEEGDKPVQMDTDAKVEAPKKKVKKISIPVVELVYGAMAAGDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYTERGPVIDQLRYCINSYRDAAMSIDPKFDHIDISEKQKVLNECAEAENWLREKKQQQDSLPKYATPVLLSADIRKKAEAVDRFCKPIMTKPKPPPPKPATPEAPATPPPQGGEQPQQQQQQSPPQDNPNVNTNENAGDNANPAPPPASAEPMETDKPENTGSA | 866 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g1456 | 866 | PANTHER | HSC70CB, ISOFORM G-RELATED | 1 | 865 | - | - | |
Aed1g1456 | 866 | MobiDBLite | consensus disorder prediction | 791 | 814 | - | - | |
Aed1g1456 | 866 | CDD | HSPA4_like_NDB | 2 | 381 | - | - | |
Aed1g1456 | 866 | Gene3D | - | 601 | 708 | IPR029048 | - | |
Aed1g1456 | 866 | Gene3D | - | 186 | 360 | - | - | |
Aed1g1456 | 866 | Gene3D | - | 38 | 113 | - | - | |
Aed1g1456 | 866 | SUPERFAMILY | Actin-like ATPase domain | 195 | 380 | IPR043129 | - | |
Aed1g1456 | 866 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 387 | 597 | IPR029047 | - | |
Aed1g1456 | 866 | Pfam | Hsp70 protein | 3 | 701 | IPR013126 | GO:0005524|GO:0140662 | |
Aed1g1456 | 866 | PANTHER | HEAT SHOCK 70 KDA PROTEIN 14 | 1 | 865 | - | - | |
Aed1g1456 | 866 | PRINTS | 70kDa heat shock protein signature | 140 | 160 | - | - | |
Aed1g1456 | 866 | PRINTS | 70kDa heat shock protein signature | 2 | 15 | - | - | |
Aed1g1456 | 866 | PRINTS | 70kDa heat shock protein signature | 30 | 42 | - | - | |
Aed1g1456 | 866 | PRINTS | 70kDa heat shock protein signature | 363 | 383 | - | - | |
Aed1g1456 | 866 | PRINTS | 70kDa heat shock protein signature | 332 | 348 | - | - | |
Aed1g1456 | 866 | Coils | Coil | 739 | 759 | - | - | |
Aed1g1456 | 866 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 603 | 700 | IPR029048 | - | |
Aed1g1456 | 866 | MobiDBLite | consensus disorder prediction | 505 | 544 | - | - | |
Aed1g1456 | 866 | SUPERFAMILY | Actin-like ATPase domain | 1 | 185 | IPR043129 | - | |
Aed1g1456 | 866 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 711 | 799 | IPR029048 | - | |
Aed1g1456 | 866 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 384 | 633 | IPR029047 | - | |
Aed1g1456 | 866 | MobiDBLite | consensus disorder prediction | 787 | 866 | - | - | |
Aed1g1456 | 866 | Gene3D | - | 709 | 794 | IPR029048 | - | |
Aed1g1456 | 866 | MobiDBLite | consensus disorder prediction | 551 | 570 | - | - | |
Aed1g1456 | 866 | Coils | Coil | 686 | 706 | - | - | |
Aed1g1456 | 866 | MobiDBLite | consensus disorder prediction | 815 | 842 | - | - | |
Aed1g1456 | 866 | Gene3D | Actin; Chain A, domain 4 | 230 | 313 | - | - | |
Aed1g1456 | 866 | Gene3D | - | 5 | 374 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g1456 | Aed-Chr1 | 13216504 | 13221734 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g1456 | 4 | 434 | Calmodulin-binding Proteins | AT1G16030 | 35.023 | 5.36e-86 | 286 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g1456 | K09489 | - | gmx:100778196 | 1477.61 |