Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1454 ATGCCCAAGAAAATTCGAGATTATCTCTTCAAAATAAAGAACCCTCGCTCTCAAGTCCGGTTACCCTCTAAGAAGTGGATTCTCTCTGGCTGCAAGCATCCTAGGACACCTTCCTTTGCCTTGTACAGTGGTAGAAACGAACCTCCTCATCAAGTTTCCAACAACAACAACAAAATCGATGATGATGCAGCCACCTTAGCAGACATTGACCGTTTCCTCTTGGAGAATTTCAAATCTCTATACCTTAAAGACGAGGTGGATGATCAAAACCAGGACCAGCTGGAAGTGGAAGAAACAACGCCACGTGATCTTCGTGGCTCCACTCGATTCTTCGTCAAGCCAGGCTTCTCGGGGTCACTGGTGGAGGATGCTTTCACAACCACAACAAGTGACGAAGCAGGATCTGTCTCGACAAATTCTTATGAGAAGGATCGCGCTCTTCTTCCTCTTCCGGATAATAGCATCGCTCTATTAACGCACTCGATGAGCCCCTACGAGGACTTCAAGCGTTCCATGCATGAAATGGTTAACAATCATGAAACCGTCGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTGTTACCTTAACCTCAATCACAAAAAATCGCACAAGTTCATTCTCAGTGCTTTCGTCGATCTCATCACCGTCATGCGTCGGAATTCTGAACCAGCTAATTCGGACAAGCCACGAAGCGTTCGAACCGTTAGAAGTGCTGGTCGGGAATTAATGAATCATAGGACCAAAAATGTCACATTAGAATTTGGGTCGTCCTAG 777 0.4569 MPKKIRDYLFKIKNPRSQVRLPSKKWILSGCKHPRTPSFALYSGRNEPPHQVSNNNNKIDDDAATLADIDRFLLENFKSLYLKDEVDDQNQDQLEVEETTPRDLRGSTRFFVKPGFSGSLVEDAFTTTTSDEAGSVSTNSYEKDRALLPLPDNSIALLTHSMSPYEDFKRSMHEMVNNHETVVDWDFMEELLFCYLNLNHKKSHKFILSAFVDLITVMRRNSEPANSDKPRSVRTVRSAGRELMNHRTKNVTLEFGSS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1454 258 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 155 217 IPR006458 -
Aed1g1454 258 Pfam Transcriptional repressor, ovate 161 216 IPR006458 -
Aed1g1454 258 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 229 - -
Aed1g1454 258 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 229 IPR038933 GO:0045892
Aed1g1454 258 ProSiteProfiles OVATE domain profile. 157 217 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1454 Aed-Chr1 13202874 13203650 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed1g1454 Ovate 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1454 - - gmx:100527503 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1454 1 13202874 13203650 Aed1g1454 1 13202874 13203650 ECH
Aed1g1454 1 13202874 13203650 Aed2g0178 2 1202258 1203638 PCT