Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1448 ATGAGGAGGAGAAGTGTGGTATTGTTCTGCTGCCTCATCCTCCAGCTACTTGAGCCCTCTGAAGGCGAACACATTGCCATTTACTGGGGTCAAAACACCGAAGAGGGAGGCCTTAGCGAGACATGTGCAACAGGAAAATACTCGTATGTCAACATAGCCTTCCTTTCCACCGTTGGGAATGGTCAAACACCTCAACTAAACCTGGCAGGTCATTGTAATGCCTCTACTAGTAATGGGTGCACTGAGATTGGGAGAGAGATTAGGAATTGTCAAGAGCAAGGGATCAAGGTGATGCTCTCTATTGGAGGAGGAACAAATAGTTACTCTCTAACATCCCTTGAGGATGCCAAAAATGTGTCGGATTACTTGTGGGACAATTTCCTGGGTGGCTCTGGCTCATGCCCACTTGGGGATGCAGTATTAGATGGCATCGACTTTGACATAGCGGGAGGTGATCCATCATTCTTGGGGAACCTTTCACGTTACCTCAGTTCACATTCACAGTCACAGACACGCAAAGTCTACTTGTCAGCTTCTCCTCAGTGTCCATTTCCTGATGCTAACCTCGGTTCGGTCCTTGATACCGGCCTTTTTGACTATGTCTGGGTACAATTCTATAACAATCCTTCATGCCAATATACCCATAACAATTTCGATAACTTTCTAAAAGCATGGAACCAGTGGGCCACATCATTAAAAGGAGGGAGGATATTTCTAGGGTTACCAGCAGACCAATCTGTAGCCGCAAGCGGTTACGTTCCACCTGATGTATTAGTGTATCAGATCATACCTGCAATAAACAAGTCACCCAATTATGGAGGTCTCACGCTGTGGTCAAGGTACGAGGATACAGTGAGTGGATATAGCACCTACATTCAAAATAATACACCAATCCCTGTGCCTATTCCCGCCTCATGCAGGAGCCATGAAAACGGTTTCGTGGAAAGTGTTGGTAACATGTCCACTGTCGGCATCCAAGTTTATGCTGCCGACATTAATGGTAGCGGTACGCACTCCTATGTATTCAGCTTTGGGGTGTTGCTGTTAGAGATACTTAGTGGCAAGAAGAATAATAGTCGGTATCACTCGGATCGCCCACTCAACCTCATAGGATACGCGTGGCAGTTCTGGAATGAAGGCAGAGCACTAGAGCTAACAGAGGCAGCATTAAATGAATTGTGTTCTGAGAATGAAGTTTTGAGATGCATTCATATTGGGCTGTTGTGTGTACAAGATCAGGCGACAGATAGACCTAGCATAATACACCTCCAAGGTCCGTGGCAGAAGGTGAAAATGGAATTTTGGCCAGAATTTGTTGCTAACAGCACGGGGAAAGAGTTTGTAGCTGGAGGGTTTGGAGGCACTGCTGGTATAATCTCAGGTTATCCATTAGACACGCTCCGTGTGATTATGCAACAGAACAACTCTGCCTCTGCCTCTGCCTTCACCATCCTTAGAAATGTCGTCGCCAAGGATGGACCAACCGCTCTCTACCGTGGCATGGCTGCACCTTTGGCCTCTGTTACCTTTCAGAACGCTATGGTGTTCCAAATTTACGCACTTCTGTCTAAGGCATTTAGCTCGTCCGTTTCTGTGAACGACCCTCCTTCATACAAGGGTGTTGCTTTGGGAGGATTTTGCTCTGGCGCTTTGCAGAGCATGTTGCTCTCCCCTGTTGAGTTAGTTAAAATTCGGCTTCAGCTTCAGCTTCAGAACACAGAACCTGATCAAAAGGGTCCCATAAGGGTCGCCAAAAACATATGGAAAAGAGAGGGTGGTCTTCGTGGCATTTATCGAGGACTTGGCATCACTATGCTAAGAGATGCACCTGCACATGGCCTCTACTTTTGGACATATGAATATGCGAGGGAGAAATTTCACCCAGGTTGTAGAAAAAACAGTGGAGAGAGCTTGAATACTATGTTGGTATCTGGAGGATTAGCCGGGGTTGTGAGTTGGGTTTTCAGCTACCCTTTGGACGTTGTAAAGACAAGGTTGCAGTCTCAGTCTCAGACACGGAAATACAATGGCATTTTGGATTGTCTCAGAAAGAGCGTTCGAGAGGAAGGCTACGTTGTGCTTTGGCGGGGTTTAGGAACTGCCGTTGCTAGAGCTTTTGTTGTCAATGGTGCTATCTTTTCTGCTTATGAAATTAGTCTGAGGTATCTCTTTCACTAA 2178 0.4633 MRRRSVVLFCCLILQLLEPSEGEHIAIYWGQNTEEGGLSETCATGKYSYVNIAFLSTVGNGQTPQLNLAGHCNASTSNGCTEIGREIRNCQEQGIKVMLSIGGGTNSYSLTSLEDAKNVSDYLWDNFLGGSGSCPLGDAVLDGIDFDIAGGDPSFLGNLSRYLSSHSQSQTRKVYLSASPQCPFPDANLGSVLDTGLFDYVWVQFYNNPSCQYTHNNFDNFLKAWNQWATSLKGGRIFLGLPADQSVAASGYVPPDVLVYQIIPAINKSPNYGGLTLWSRYEDTVSGYSTYIQNNTPIPVPIPASCRSHENGFVESVGNMSTVGIQVYAADINGSGTHSYVFSFGVLLLEILSGKKNNSRYHSDRPLNLIGYAWQFWNEGRALELTEAALNELCSENEVLRCIHIGLLCVQDQATDRPSIIHLQGPWQKVKMEFWPEFVANSTGKEFVAGGFGGTAGIISGYPLDTLRVIMQQNNSASASAFTILRNVVAKDGPTALYRGMAAPLASVTFQNAMVFQIYALLSKAFSSSVSVNDPPSYKGVALGGFCSGALQSMLLSPVELVKIRLQLQLQNTEPDQKGPIRVAKNIWKREGGLRGIYRGLGITMLRDAPAHGLYFWTYEYAREKFHPGCRKNSGESLNTMLVSGGLAGVVSWVFSYPLDVVKTRLQSQSQTRKYNGILDCLRKSVREEGYVVLWRGLGTAVARAFVVNGAIFSAYEISLRYLFH 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1448 725 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 432 724 - -
Aed1g1448 725 SUPERFAMILY Protein kinase-like (PK-like) 336 425 IPR011009 -
Aed1g1448 725 Gene3D Mitochondrial carrier domain 443 725 IPR023395 -
Aed1g1448 725 Pfam Glycosyl hydrolases family 18 25 247 IPR001223 GO:0005975
Aed1g1448 725 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 23 299 IPR001223 GO:0005975
Aed1g1448 725 Gene3D Transferase(Phosphotransferase) domain 1 308 433 - -
Aed1g1448 725 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 432 724 - -
Aed1g1448 725 ProSiteProfiles Solute carrier (Solcar) repeat profile. 536 625 IPR018108 -
Aed1g1448 725 Gene3D Glycosidases 24 295 - -
Aed1g1448 725 PRINTS Mitochondrial carrier protein signature 645 667 IPR002067 GO:0055085
Aed1g1448 725 PRINTS Mitochondrial carrier protein signature 459 473 IPR002067 GO:0055085
Aed1g1448 725 PRINTS Mitochondrial carrier protein signature 598 616 IPR002067 GO:0055085
Aed1g1448 725 PRINTS Mitochondrial carrier protein signature 446 459 IPR002067 GO:0055085
Aed1g1448 725 ProSiteProfiles Solute carrier (Solcar) repeat profile. 441 525 IPR018108 -
Aed1g1448 725 SUPERFAMILY (Trans)glycosidases 20 292 IPR017853 -
Aed1g1448 725 ProSiteProfiles Solute carrier (Solcar) repeat profile. 636 722 IPR018108 -
Aed1g1448 725 SUPERFAMILY Mitochondrial carrier 443 717 IPR023395 -
Aed1g1448 725 CDD GH18_hevamine_XipI_class_III 25 294 IPR045321 -
Aed1g1448 725 Pfam Mitochondrial carrier protein 641 723 IPR018108 -
Aed1g1448 725 Pfam Mitochondrial carrier protein 543 626 IPR018108 -
Aed1g1448 725 Pfam Mitochondrial carrier protein 442 527 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1448 Aed-Chr1 13175397 13181912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1448 432 725 Antiporters AT1G79900 70.408 1.89e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1448 K15109 - gmx:100812034 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1448 1 13175397 13181912 Aed1g1448 1 13175397 13181912 ECH