Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1445 GAGGCGATTGAGAAGAATTTCGGGGACTCTTGCTTGCTGGGGAAGGGAACAGGGAGCTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCTCCGCCTGCGCTTACCCTGCAGCACGCACCAGGAAATATAACTGGAGTGTCAAGGCAATCCGCAGAAAGACCACCGGAACTGGTAGGATGAGGTACTTGCGTAACGTGCCTCGCCGATTCAAGAGTGGCTTCAGAGAAGGTACTGAAGCAGCACCAAGGAAGAAGGGAGCAGCTGCCTCTACATAA 324 0.5556 EAIEKNFGDSCLLGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARTRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAAST 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1445 107 PANTHER 60S RIBOSOMAL PROTEIN L37 9 106 - -
Aed1g1445 107 Gene3D - 13 99 IPR011331 GO:0003735|GO:0005840|GO:0006412
Aed1g1445 107 ProSitePatterns Ribosomal protein L37e signature. 16 35 IPR018267 GO:0003735|GO:0005840|GO:0006412
Aed1g1445 107 Pfam Ribosomal protein L37e 15 65 IPR001569 GO:0003735|GO:0005840|GO:0006412
Aed1g1445 107 PANTHER RIBOSOMAL PROTEIN L37 9 106 - -
Aed1g1445 107 SUPERFAMILY Zn-binding ribosomal proteins 14 67 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1445 Aed-Chr1 13163801 13166592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1445 13 106 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.298 9.54e-58 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1445 K02922 - gmx:100527725 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1445 1 13163801 13166592 Aed1g1445 1 13163801 13166592 ECH