Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1437 ATGGGCGCCGACATGTCCAACAACAATCCTCCTCCCACTTCTCACGCTAAGGACTTCTTCGCTTCCCCAGCTCTCTCTCTCAGCCTTGCTGGGATTTTTCGCCATGCCGCGGCGGATGAGCCTGCTGCCACTTCTAACATGGAGGTGGAGGAAGGGGAAGAAGGGAGTGGAGGCGGTGACAGGTTAGAGGAAATTAGCAGCGAGAACTCCGGCCCCACGAGATCCAGATCAGAGGATGATTTTTTTGAAGGTGAACCTGAACCCGAGGATGATGACCCCGCCGACGGGGACAAGAACAACAACAAGAAGAAAAAAAGAAAGAAATATCACAGGCACACTGCTGACCAGATCAAAGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTAAGCAAGCAATTAGGCCTTGCCCCACGGCAAGTCAAATTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAATTCTTTGTTGAAGTCAGAAATAGAGAAACTAAAGGAGAAAAATAAGACCTTCCGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGCGTGCCCACCACAAGCAGAGATAGTGGCATGCCAACTGAAGAACAACAACTGCGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTCCGATCAGCTTTAGGGAAATATGCACCAGCTGGGTCAACGTCCCCTTCATGTTCTTCTGGGCATGACCAAGAGAATAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGGACTTGATAAGTCAAGGATTATAGATATAGTAAACCAAGCTATGGAGGAGCTCATTAAGATGGCCACCGTGGGGGAACCATTATGGCTTCGTAGCTTTGAGACTGGTCGCGAAATTCTTAACTACGATGAATATGTTAAGGAGTTTGCAGTTGATAATTCAAGCAGCAGTACTAGAAATGCGCCAAAGAGATCCATTGAAGCCTCAAGAGACACTGGAGTTGTTTTTGTCGATCTCCCTCGCCTTGTCCAAAGTTTTCTAGATGTGAATCAGTGGAAGGAAATGTTTCCGTGTTTGGTATCTAAGGCAGCAACTGTTGATGTTATATGCAATGGAGAGGGTCCTAACAGGAATGGTGCAGTGCAACTGATGTTTGCTGAGCTGCAAATGCTCACTCCCATGGTGCCCACAAGAGAAGTCTATTTTGTCCGTTTCTGCAAACAGTTGAGTGCTGAACAGTGGGCAATCGTTGATGTATCCATAGACAAAGTAGAAGACAACATTGACGCGTCCCTCGTGAAATGCAGAAAACGCCCTTCCGGTTGCATTATTGAGGACAAGTCCAATGGCCATTGCAAAGTAATATGGGTGGAGCACTTGGAGTGCCAGAAGAGTGCAGTCCATTCAATGTATCGCACCATTGTGAACAGTGGGCTAGCTTTCGGGGCCAGGCATTGGATTGCGACTCTACAACTTCAATGTGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACCGGTGTTGCGACGTTGGCGGGGAGAAAAAGCATATTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAATTGGCGCGTCAAGCTTCCACACATGGACTAAGGTTACAAGTAAAACCGGGGAAGACATAAGGATAAGTTCTAGAAAGAACTTGAACAATCCTGGTGAACCTCTTGGCTTGATATTGTGCGCTGTTTGTTCTGTATGGTTGCCTGTCTCACCTAATCTTCTCTTTGATTTCTTGAGGGATGAATCGCGCCGAACTGAATGGGACATCATGTCAAGTGGTGGTGGGACAGTGCAGTCCATTGCAAATTTAGCCAAAGGACAAGACCGAGGCAATTCCGTAGCCATTCAAACAATAAAATTGAAAGAGAACAGTGTGTGGATAGTGCAAGATAGCTGCACAAACCCATATGAGTCAATGGTGGTATATGGTTCTGTGGACATTAGTGGCATTCAGTCAGTGATGACAGGATGTGATTCAAGCAATCTTGCCATACTGCCCTCGGGATTCTCAATTATTCCTGATGGTCTTGAGTCAAGGCCATTGGTCATTAGTTCAAGGCAGCAGGAAGACAAAAATACTGAGACTGAGGGAGGTTCTTTGTTTACTATGGCATTCCAGATTCTTACCAATGCTTCTCCCACTGCCAAGTTAACAATCGACTCTGTGGACTCGGTCAACACTCTTGTATCTTGTACATTGAGAAATATCAGAACAAGTTTACAATGTGAAGATGCTTAA 2304 0.4544 MGADMSNNNPPPTSHAKDFFASPALSLSLAGIFRHAAADEPAATSNMEVEEGEEGSGGGDRLEEISSENSGPTRSRSEDDFFEGEPEPEDDDPADGDKNNNKKKKRKKYHRHTADQIKEMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKTFRETINKACCPNCGVPTTSRDSGMPTEEQQLRIENAKLKAEVEKLRSALGKYAPAGSTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIIDIVNQAMEELIKMATVGEPLWLRSFETGREILNYDEYVKEFAVDNSSSSTRNAPKRSIEASRDTGVVFVDLPRLVQSFLDVNQWKEMFPCLVSKAATVDVICNGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTKVTSKTGEDIRISSRKNLNNPGEPLGLILCAVCSVWLPVSPNLLFDFLRDESRRTEWDIMSSGGGTVQSIANLAKGQDRGNSVAIQTIKLKENSVWIVQDSCTNPYESMVVYGSVDISGIQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVISSRQQEDKNTETEGGSLFTMAFQILTNASPTAKLTIDSVDSVNTLVSCTLRNIRTSLQCEDA 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1437 767 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Aed1g1437 767 Gene3D - 94 176 - -
Aed1g1437 767 SUPERFAMILY Bet v1-like 268 502 - -
Aed1g1437 767 CDD START_ArGLABRA2_like 270 501 - -
Aed1g1437 767 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Aed1g1437 767 Pfam START domain 277 502 IPR002913 GO:0008289
Aed1g1437 767 Coils Coil 162 189 - -
Aed1g1437 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 18 765 - -
Aed1g1437 767 SMART START_1 275 502 IPR002913 GO:0008289
Aed1g1437 767 SUPERFAMILY Bet v1-like 524 698 - -
Aed1g1437 767 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Aed1g1437 767 MobiDBLite consensus disorder prediction 40 114 - -
Aed1g1437 767 CDD homeodomain 110 161 IPR001356 GO:0003677
Aed1g1437 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 765 IPR042160 -
Aed1g1437 767 Gene3D - 300 497 IPR023393 -
Aed1g1437 767 SUPERFAMILY Homeodomain-like 95 164 IPR009057 -
Aed1g1437 767 ProSiteProfiles START domain profile. 266 505 IPR002913 GO:0008289
Aed1g1437 767 Coils Coil 213 233 - -
Aed1g1437 767 SMART HOX_1 105 167 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1437 Aed-Chr1 13118750 13125798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1437 65 766 Homeobox Transcription Factor Family AT1G79840 65.823 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed1g1437 START 2e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1437 K09338 - gmx:100808292 1318.52