Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1430 ATGATGGTTGGTAACCCTAACTGGTGGAGCATGCATCATCAATCTTCTATGATCCCTCCCCAATATGTGTTTCCACCTTCTTCAATTCCTTTTAATTCTTTGACTGAAAATCCAGAGCCTCCTCAGTCATGGAGCCAACTGCTTTTTACTGGATTACCGGGAGAAGAAGAGAAACTTGGTTTCAGTCATTTTCAGCCGAAAAAGTTGGAAAACTGGGATGTCCAAATTCTTAATACTGCTTCCAGAGTTCCATTTCTTGATGTAATAAAGCAAGAAGCTTCTCAAAGGGGTAATTTGTACGACCATGGGCATGGGCATGGGCGTGAGGAATTTCAGGCTTATGGGCCAGCAGCTGGCTCATCTTGGTCATATATGGTGCCTGTTTCTTCCCCCGAGTCTCGTGTCAGTAGTAATAATATATTGGACTTCACTTATAACAAGTCAGATCATAGCAAAAATCTACTACAAGACCAAATATCCGAGTGTAATAGCAGAGCTACTGCTGGAGTTTGTAAGAAGGCTAGGGTTCAGCCATCTTCAAGCCACGCACCTCTCAAGGTGCGGAAGGAGAAGCTAGGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCGGTCCTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTCAGCTCTCCTTACTTGGACAATGCATCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTATGTTTTTTCAGAGGACCCCGGTCAGGAGGATGCAGAAGTAGAAAAAGCAAAGGATTTGAAGAGTAGAGGGTTGTGCTTGGTTCCAGTGTCTTATACACATAATGTTGGAAGCGAAAATGGGGCCGATTACTGGGAACCCGCATACGGCAGAGGATTTTAA 927 0.4369 MMVGNPNWWSMHHQSSMIPPQYVFPPSSIPFNSLTENPEPPQSWSQLLFTGLPGEEEKLGFSHFQPKKLENWDVQILNTASRVPFLDVIKQEASQRGNLYDHGHGHGREEFQAYGPAAGSSWSYMVPVSSPESRVSSNNILDFTYNKSDHSKNLLQDQISECNSRATAGVCKKARVQPSSSHAPLKVRKEKLGDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDNASKNMRNQQSVHGERNYVFSEDPGQEDAEVEKAKDLKSRGLCLVPVSYTHNVGSENGADYWEPAYGRGF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1430 308 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 8 295 - -
Aed1g1430 308 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 295 - -
Aed1g1430 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 237 IPR036638 GO:0046983
Aed1g1430 308 Gene3D - 183 251 IPR036638 GO:0046983
Aed1g1430 308 CDD bHLH_AtbHLH_like 186 233 IPR045239 -
Aed1g1430 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1430 Aed-Chr1 13070249 13073755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1430 1 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 38.209 7.50e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1430 - - gmx:100783401 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1430 1 13070249 13073755 Aed1g1430 1 13070249 13073755 ECH