Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1390 ATGGGAATGCCAAAGAGTTTCCTTGTTGGTTTTGTAGGAGGTCTAGTTCTTGCCGTTCTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGATTGTGGAGCTCCTGCAGATGTCAGCTATACTGAATCGAAGACAGGCATAAATTATGCTTCAGATGCAAATTTCATAAATACTGGTGTGAGCAAGTCAATAGTTTCTCAACTCAAAAACGACTACCAACGACAGCTGTGGGATGTGCGAAGCTTCCCGGAAGGAAAAAGGAACTGTTACAAAATTAACAGCACTAGAGGCTCTAAGTATCTCATCCGAGCTAGTTTTTTGTACGGAAATTATGATGGCCTAAATGCATCACCACAGTTTGATCTTCTTCTTGGGGCTAACCGATGGGATACAGGGAACATAAACAATGCATCCATTGACCAACACAAGGAGATCATATATGTACCTTCACTGGATTATGTACAAATCTGTCTGGTTGACACAGACCATGGGACACCATTTATATCTGCCATAGAATTTAGAACTTTGACAGATAATATTTATGTCACTGAATCTGGATCATTGGAAACTTACATCCGGTGGGATATAGGTTCAAACAGAGGCTACAGGTACAAGGATGATGTTTTTGATCGTCTCTGGAACTATGCCAACATCAATCATTGGACAAGTGTTTCAATTCCTGCTGATGACTTAGACTTATATCAGAACGTATTCCAACCGCCAGCTATTGTCATGAGCACTGCAGTTACACCAGCAAATGTTAGTGTTCCTTTGGTAATAAGCTGGGTGCCAGATGATCCAATTGAGAAATTCTATGTTTACTTGTACTTCATGGAGATTCAAGTGTTAGAGTCAAATCAGACGAGAGAATTCAACATCATGCAAAATGGTAAACCAATGTATTCAAATTTTTCACCACGGAATCAGCTTGTCACCACTTTATATACCTCGTCAGGCTCCAGTGGAAAAGAAATGACATATTCTCTTGAAAAGACCAAAAATTCAACCCTGCCTCCCATCATCAATGCCATTGAGATTTACAAAGTAAAAGACTTCCTTCAACCAGATACATTCCAAGGAGATGATATGCCACGAAAATATGATTTCTCACATTTTAAATCCATTTATTTGTCAGTTTATGGGGTGAAAAGAGATTGGCAAGGTGATCCGTGCAGCCCTGTTGAGTACTTGTGGCATGGTCTGAATTGTACTTATCTTGGAAAAGAATCTCCAAGAATCATAACTTTGTAA 1257 0.3962 MGMPKSFLVGFVGGLVLAVLIQAQDQSGFISIDCGAPADVSYTESKTGINYASDANFINTGVSKSIVSQLKNDYQRQLWDVRSFPEGKRNCYKINSTRGSKYLIRASFLYGNYDGLNASPQFDLLLGANRWDTGNINNASIDQHKEIIYVPSLDYVQICLVDTDHGTPFISAIEFRTLTDNIYVTESGSLETYIRWDIGSNRGYRYKDDVFDRLWNYANINHWTSVSIPADDLDLYQNVFQPPAIVMSTAVTPANVSVPLVISWVPDDPIEKFYVYLYFMEIQVLESNQTREFNIMQNGKPMYSNFSPRNQLVTTLYTSSGSSGKEMTYSLEKTKNSTLPPIINAIEIYKVKDFLQPDTFQGDDMPRKYDFSHFKSIYLSVYGVKRDWQGDPCSPVEYLWHGLNCTYLGKESPRIITL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1390 418 Pfam Malectin-like domain 32 351 IPR024788 -
Aed1g1390 418 PANTHER OS07G0107800 PROTEIN-RELATED 16 418 - -
Aed1g1390 418 Gene3D - 189 353 - -
Aed1g1390 418 PANTHER PUTATIVE-RELATED 16 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1390 Aed-Chr1 12798882 12800382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1390 1 418 Receptor kinase-like Gene Family AT1G51800 44.575 1.74e-115 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1390 - - gmx:100785345 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1390 1 12798882 12800382 Aed1g1390 1 12798882 12800382 ECH
Aed2g0254 2 1668911 1672614 Aed1g1390 1 12798882 12800382 PCT