Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1365 ATGGAATTGCAGCTTGTTTTCCTGCTAATTAAGCTACATTTTGTTATATGTATTCCCCAGCTTCATGAATATGCTGCCACTTATCTGCACCATTCGAGAATCAGAAGTCCTTCAAGTATTGCATTCCCACAATCAGAGTCACCTTCTGGAGTTCCTGATCATAGTATTGCACTTCCACCTTCCGAGGCATCTTCTAGAATTCCCAGAAGTATTGCACTTTCGCCTTCTGAATCATTCCCTAAGATGAAATGGACGCACAGTTCTATGGACACTCCAATATCTCACCATAAGCATCACCATTCCAGAAGAAAGTCCAGCAAACAAGTTTCTGGGCCAACCTATCCACTTCAACCTCATACTCATCAAGGTCCTCCAGTCTTCAGATCACAACCTATGAGTCGAGTTTTACATGTACCCACACCAGCACCAGCACCAGCACCATCAACAACAACAGTTCTATCACACCACTTGAGTGTGCCCTCTCCTTCACCTAGAATTTCACCTCCGGGATCATCATTGAAGAAGACAAGGACTCCACCACCAGCATATGCTTTGGTTCTACCATCTCCACCACCTAACAAAGATTGTATGTCGATGACTTGCTCTGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCATTTCAAGTTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGATGGCCAAAGAAATTGCAGCTTGTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGAGCTGATGCAACTAGCCAGCAGCTCGAGAAAACCACTGTTCTCATAAACTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACGGCATTCTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAACGATGCTTCTGCCTTTGGTGACTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTTATGGTATAGATGTTGAATCATACCCTGGTCGCGGCAACAATGGAACAATAGTGAAACCTTTAGGAGTAGATATAAATGTCTCAAGGAAGAAAAAAGAAGGAAGTGGTGGAAGAATGGTTATTATGATCGTGCTGTCATCTTTTACTGTCTTTGTTCTATTCATTGGAGTTGCCTGGCTTTGTCTCTTGAAATGTGGTTCCTGCACTCTTGTTGAACCTGAGCAAATTCAAGATGTCAAAATTGCATCCTCTTCAAAGCGATCAGGGACTGCCAGCGCTAGCTACGTAGCACCTGAATACGCAATGACTGGACATCTTCTTGTGAAAAGCGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAGCCACCAGGCCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATGGACCCAGTTATAAAGCCCAGTGTTTCTGTCGATACCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTATGCAGTGAGTTTGAGGAAAGAAGTTATGTGAGACCAAAAAGTTTTCGAGGAAATGGTCTTGCAATTGCAACCAGTGTTCCAAGTGAGAGAGTGGGCTTTTCAGAGTGTAACAAAACCCTGCCTCAGCCTGGTTAA 1725 0.4365 MELQLVFLLIKLHFVICIPQLHEYAATYLHHSRIRSPSSIAFPQSESPSGVPDHSIALPPSEASSRIPRSIALSPSESFPKMKWTHSSMDTPISHHKHHHSRRKSSKQVSGPTYPLQPHTHQGPPVFRSQPMSRVLHVPTPAPAPAPSTTTVLSHHLSVPSPSPRISPPGSSLKKTRTPPPAYALVLPSPPPNKDCMSMTCSEPLTYTPPGSPCGCVWPFQVKLRISIAIYKFFPLVSKMAKEIAACVLLNRNQVRIVGADATSQQLEKTTVLINLVPQGVKFDDTTAFLIYKKFWQREILNDASAFGDYEVLYVHYPGLPPSPPSNVYGIDVESYPGRGNNGTIVKPLGVDINVSRKKKEGSGGRMVIMIVLSSFTVFVLFIGVAWLCLLKCGSCTLVEPEQIQDVKIASSSKRSGTASASYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIMDPVIKPSVSVDTMVKVAAIASMCVQPEVTQRPFMGEVVQALKLVCSEFEERSYVRPKSFRGNGLAIATSVPSERVGFSECNKTLPQPG 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1365 574 MobiDBLite consensus disorder prediction 82 183 - -
Aed1g1365 574 MobiDBLite consensus disorder prediction 107 127 - -
Aed1g1365 574 MobiDBLite consensus disorder prediction 147 161 - -
Aed1g1365 574 PANTHER OS01G0750732 PROTEIN 422 547 - -
Aed1g1365 574 Pfam Protein tyrosine and serine/threonine kinase 412 527 IPR001245 GO:0004672|GO:0006468
Aed1g1365 574 MobiDBLite consensus disorder prediction 40 68 - -
Aed1g1365 574 PANTHER OS01G0750732 PROTEIN 7 420 - -
Aed1g1365 574 PANTHER OS01G0750732 PROTEIN 422 547 - -
Aed1g1365 574 SUPERFAMILY Protein kinase-like (PK-like) 417 528 IPR011009 -
Aed1g1365 574 Gene3D Transferase(Phosphotransferase) domain 1 380 545 - -
Aed1g1365 574 PANTHER OS01G0750732 PROTEIN 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1365 Aed-Chr1 12645055 12649629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1365 423 536 Receptor kinase-like Gene Family AT5G56890 78.947 5.58e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aed1g1365 PK_Tyr_Ser-Thr 7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1365 - - gmx:100775318 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1365 1 12645055 12649629 Aed2g0302 2 1988890 1995414 PCT