Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1362 ATGGCGGCAACCAAGAACGAATTAGCAGAAGAATCAGCAGGCAACAAAAGGGTCCAATACCCAGTGGAGTCTTCCTCCTACAAGCTTCTGAACGAGATAGGCGAAGGCGTGAGCGCCGTGGTCTACAAAGCCCTCTGCATCCCCATCAACTCCACCGCAGTAGCAATCAAATCCATCGACCTTGATCGTTCCCGCCCCGACTTGGACGATGTTCGTCGCGAGGCCAAGACCCTATCCCTCCTCTCTCACCCGAACATCCTGAAAGCACACTGTTCCTTCACCGTGGATCGCCGCCTCTGGGTGGTCATGCCCTTCATGGCCGCAGGATCGTTGCAGTCCATTATCTCTCATTCCCACCCCAACGGCCTAACCGAGCCCTGCATCGCGGTGGTTCTGAAAGACACTCTGAACGCTCTCTCCTACCTCCACGGGCAGGGCCATCTCCACAGAGACGTAAAAGCCGGCAACATCCTGGTAGACACAAACGGACAAGTGAAGCTCGCGGATTTCGGTGTCTCTGCTTCGATCTACGAGTCAACGACGTGTTCGTCTATGAAGTTGACCGATGTTGCGGGGACGCCGTATTGGATGGCTCCGGAGGTGATACACTCGCACACAGGGTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCTTTGGAGCTTGCGCATGGAAGGCCTCCTCTCTCGCACCTCCCTCCTTCCAAGTCCATGATGCTCAAGATCACCAAGCGCTTTCGTTTCTCCGATGATTTCGACAAGTATAGGAAGGGCTACGGCGGCAAGAAGTTCTCTAAGGCCTTCAAGGACATGGTTGCTTCTTGTCTCGACCAGGACCCTTCCAAGAGACCCACTGCTCACAAGTTGCTCAAGCACCCCTTCTTTAAGAACTCTAAGGGAACCGATTTTCTGGTCAAGAATGTTCTGCAGGGATTGCCCAGTGTGGAGAAAAGGTATAAGGAGAGCAAGGTTAATAATGTGCATGCAGATGATGATGATGATGATGATGAGGACCCCGCCTTGCTGGTTAAGCAGAGAAGGATCAGTGGCTGGAACTTCAACCAAGACGGGTTGGAACTTGACCCTGTGTTTCCAAAGGATGATGCTGCTGCTGCTGCGGCGGCGGTGGTTAAAGAGGTTCGGTTTGGAGGGGAAACGGTTATCCAACAAATGGAAAAAGTGGGTGGTGGTGTTGTGAACAAGGAAGGCATGTTGGCGACTCTGAATGTACTGAAAGGGAGCTTGGAACAAGAGCTGTGGCAAGTGAAGTTTCTGGTGAATACGATACAAGGAACTAATGATCAGGAGTCTGATCATAGTATTAATATTAATAGCGAGGACCACGAGATTTCTAAGCTGAGAGCTGAATTGGAAAATGAGAGGAACAAGAACTTGCAGTTGGAATTGCAGCTCCAGAACTGCAACCTCCACCTTTCTTAG 1446 0.5124 MAATKNELAEESAGNKRVQYPVESSSYKLLNEIGEGVSAVVYKALCIPINSTAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLKDTLNALSYLHGQGHLHRDVKAGNILVDTNGQVKLADFGVSASIYESTTCSSMKLTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDDFDKYRKGYGGKKFSKAFKDMVASCLDQDPSKRPTAHKLLKHPFFKNSKGTDFLVKNVLQGLPSVEKRYKESKVNNVHADDDDDDDEDPALLVKQRRISGWNFNQDGLELDPVFPKDDAAAAAAAVVKEVRFGGETVIQQMEKVGGGVVNKEGMLATLNVLKGSLEQELWQVKFLVNTIQGTNDQESDHSININSEDHEISKLRAELENERNKNLQLELQLQNCNLHLS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1362 481 Coils Coil 445 479 - -
Aed1g1362 481 ProSitePatterns Protein kinases ATP-binding region signature. 33 57 IPR017441 GO:0005524
Aed1g1362 481 Gene3D Transferase(Phosphotransferase) domain 1 109 342 - -
Aed1g1362 481 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1362 481 SMART serkin_6 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1362 481 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 10 477 - -
Aed1g1362 481 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 10 477 - -
Aed1g1362 481 SUPERFAMILY Protein kinase-like (PK-like) 25 310 IPR011009 -
Aed1g1362 481 Gene3D Phosphorylase Kinase; domain 1 15 105 - -
Aed1g1362 481 Pfam Protein kinase domain 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1362 Aed-Chr1 12634295 12635740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1362 17 468 MAP Kinase Kinase Kinase Kinase AT4G14480 55.072 4.62e-176 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Aed1g1362 Pkinase 6.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1362 K08835 - gmx:100820227 743.806