Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1361 ATGGACAACAGCATGTCAAGGAGTACCACACAGGCTTGTGCAGCTTGTAAGTACCAACGCAGGAAGTGCGGGTCCAACTGCATTCTCGCACCTTATTTTCCTCATGATCGCCAAAAACAGTTCCTTAATGCCCATCGTTTATTCGGTGTTGGCAAGATCACCAACATGATCAAGCCTCTTGATCAACATAACCGTGATCTCGCCATGAGCACTGTTATCTTCCAGTCCGACATGCGTGCCAGAGACCCCATCGGTGGTTGCTACAGGCTCGTCCTTCAATTGCAATCTCAGATCGAATATGCCTCTCGAGAGCTTCATCTCCTTCTTCAACATCTAGCTTTCTTTAAACAACAACAACCTAATAATAATTCTCATCGTGACATCATCATCAATAATATTAATCCCACGCCTCCTAATTCTTACCTGCACCGCCACCACCTTGAACAACAACAACAAATGCCACCACCACACGATCAAGATCATCAACAACAACAACAATGCTTTAGTTACAACATTCCCCTACAGGACGACATCAACATGTGGGCCATTCACAACTCCGTTCCTTTGTCGCCTTTGTCATTAGAGAATGACATCGACCAAGATCCTGTTGTTGTTGATTATGGATATGATCAAAAGCCTGACGTTCTTGACCTAATGGATAAAATGGAATCAGATCTCACTGACAATGATGATGAGCCGATTTGCGGCAGGGTGGAATCGGAAGTAGTAACTAAGAAAGGTGGAGGTTGCAGTTCTGGAGCTGCAATTCCAACTGCAAGTTCTTGTTCCTCTCATTTTCCAATTCAGCTCTCAGCTTAG 819 0.4457 MDNSMSRSTTQACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMIKPLDQHNRDLAMSTVIFQSDMRARDPIGGCYRLVLQLQSQIEYASRELHLLLQHLAFFKQQQPNNNSHRDIIINNINPTPPNSYLHRHHLEQQQQMPPPHDQDHQQQQQCFSYNIPLQDDINMWAIHNSVPLSPLSLENDIDQDPVVVDYGYDQKPDVLDLMDKMESDLTDNDDEPICGRVESEVVTKKGGGCSSGAAIPTASSCSSHFPIQLSA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1361 272 Pfam Lateral organ boundaries (LOB) domain 12 107 IPR004883 -
Aed1g1361 272 PANTHER LOB DOMAIN PROTEIN 7 220 - -
Aed1g1361 272 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 220 - -
Aed1g1361 272 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1361 Aed-Chr1 12631755 12634383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1361 11 116 AS2 family AT3G13850 62.264 1.15e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed1g1361 LOB 9.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1361 - - gmx:102668887 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1361 1 12631755 12634383 Aed2g0308 2 2028949 2030844 PCT