Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1351 ATGGGAAGGTGGTTTAAGTCACTTGTTCCTTTTAGAAAGACCTCAACTTCGACTACTGATCAAGAGAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCTTCTTCAGAAGAGTCCATGAAGAAAGTTGGTGGTAGTGCTGCATCTGATTCTTCCCTTACTTATGCAGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCTTCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTATTTCGAGCCTTCTTGGTAAACTTTGCTAGACGAGCTTTGAGGGCCTTGAGGGCAGTGGTAAGGCTACAAGCTATTTTTCGAGGCTGGCTAGTAAGAAAGCAAGCAGCTGTTACTCTGAGGTGCATGCAGGCTCTTGTTCGAGTTCAGGCACGTGTGAGGGCAAGGAATGTTAGGAATTCTCCTGAAGGGAAAGCAGTGCAGAAATTACTAGATGAGCATCGCAATCAAGCTGATCCTTTTGAGCAAGGATGGTGTGACATTCCTGGAACTGTGGATGAAGTTAGAACAAAGCTGCGTATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACTCAGGTAACAAGGATGGTTGCTAGTCCAAACTCAAAAGCCACTAAGGCATTGATGACACCTCTGAAGCATAACAACCTACGCAATAAGAGCTTAGGATACAGTTTGTTGGAACGCTGGATGGAGGCCAAACCATGGGAGAGTCCAATCTCAAGGAAGAGTGAAGACCTTGTTCCTGCTTTTCAAACAAGAAGGAATGGTATGACAACTAGGATTTCTGTTAAGCCTATTATAACCACTCAATCCACTTCATCATCTTCGGCTATAAGCTCTGAATGCGTGTTTGATGATAGCCCTGTGTCAACATCTTATACATCTGGATCTCCATCGTTGCCATCCACCAATACTGTTTTGGTAGAAGAAGCAGCAGAGGAAAGAGATATTCATCAGCCAAGTTACATGAATTTGACAGAATCAACTAAGGCTAAACTGAAAGCTTACAAGAGTTCTTCACAGAATTCAAAGAGACTTGTAATGGAAGATTGCGTGCCTCACAGCACAACAACAAGAACAACAGGCTTTGTGAATGGAGATACTAAAAGCAGTTTTGATTCTTATCCTTCAGTTAACTTGTGGAAGGATTCTTGTGCAACACCTCTAAGGGCAAGTTATCAAAAGCGACAAATTAGGATATGA 1239 0.4383 MGRWFKSLVPFRKTSTSTTDQEKGGDNKSKKKWKLWRASSEESMKKVGGSAASDSSLTYAVAVMVPKDFKLFKQEWAAIRIQAVFRAFLVNFARRALRALRAVVRLQAIFRGWLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHRNQADPFEQGWCDIPGTVDEVRTKLRMRQEGAIKRDRAMAYSLSTQVTRMVASPNSKATKALMTPLKHNNLRNKSLGYSLLERWMEAKPWESPISRKSEDLVPAFQTRRNGMTTRISVKPIITTQSTSSSSAISSECVFDDSPVSTSYTSGSPSLPSTNTVLVEEAAEERDIHQPSYMNLTESTKAKLKAYKSSSQNSKRLVMEDCVPHSTTTRTTGFVNGDTKSSFDSYPSVNLWKDSCATPLRASYQKRQIRI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1351 412 PANTHER IQ-DOMAIN 5-RELATED 3 408 - -
Aed1g1351 412 Pfam IQ calmodulin-binding motif 101 118 IPR000048 GO:0005515
Aed1g1351 412 Pfam IQ calmodulin-binding motif 76 90 IPR000048 GO:0005515
Aed1g1351 412 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 3 408 - -
Aed1g1351 412 ProSiteProfiles IQ motif profile. 74 102 IPR000048 GO:0005515
Aed1g1351 412 SMART iq_5 98 120 IPR000048 GO:0005515
Aed1g1351 412 SMART iq_5 73 93 IPR000048 GO:0005515
Aed1g1351 412 MobiDBLite consensus disorder prediction 9 34 - -
Aed1g1351 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 143 IPR027417 -
Aed1g1351 412 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Aed1g1351 412 Gene3D - 72 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1351 Aed-Chr1 12561342 12563158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1351 2 392 IQD Protein Family AT2G26180 42.619 1.71e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1351 - - gmx:100788715 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1351 1 12561342 12563158 Aed2g0322 2 2112169 2114361 PCT