Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g1336 | ATGGGTTCGAATAATAATGCAGAAGAAATAAAGTCCACCGTGATCGGCATTGATAGCGACCGGAACAGCCCACACGCGGTCAAATGGACTGTAGAACATCTCTTGAAGAAGAACTCATCTTGCACCCTCATCCACGTCACAACCAATAATAAGAACTTATTGTATCCCCATGATTCTGAGCTTGTCCCTAAACAAGGTCGTCCACCAACTGAAAAAGAATTGCAGCAGTTTTTTCTTCCCTTTCGAGGATTTTGTGCACGAAAAGGGATCGTAGCTAAGGAGTTAGTTCTGCATCACATTGACGTTTCAAAGGCGCTTACTGATTACATAGTTGACAACTCTATCAATAATATTGTTGTCGGCGCTTCCCGCTGGAATGCTCTTATAAGGAAATTTAAAGATGTAGATGTGGCAACAAGCTTAGTGAGGTCTGTGCCAGAGTCTTGCACGGTGCATGTTATATCAAAAGGAAAAGTGTGCGTAAAATCGGTAAAGTATGGAGTTAGCCAAGGCTCAAACAATGATGGGGCATCTCCACAACTATCGGATGAAAGCTGCTCCTCACAAAATTCATCCAATCGAAGTTCCCTCTTTGGTTATCAATTGACTGAGACGTCGTCACATGAAAACCAAGATGCAGTACAGAATTCAATCAGTTACACTTGTAGGAGCAAATCTGAGAAAAGGTCCCAAGTAAGTAATTGGCCTTGCTTGGTTATCTTACTGAAGAGCTTGGAAATAGAAAAAAGGAAACTAGAACAGGAGAGAAAGACAAAGAAGTGTAATTCGACACGTAGGGAAACTACATCAGCAAAACAGAAGGCAATGAAGCATGGAAAGTTTATGCAAGAAGATGATGTAGTTAAAGCTTGGCTTGCTGAAGAGGCTACATTGACTTTGGCAGAGGTAGAAAGGAAGAAAACCAAGGCAGCTATGGAGTCAGCTGAAATGTCAAGATGCCTGGCAGAAATGAAGAGCCAGAAGGGAAAACAAAGTGAAATAAGAGTCATGCATGAGGAAGAAGAGAGGAATAGAGCATTAAATGCAAGTGCACATAACAAAATTCTATTTAAAAGATACAATATTAAAGAAATTGAAGTTGCAACTAATTACTTTGACAATGCCCTCAAAATCGGTGAAGGTGGATATGGACCTGTTTTTAAAGGGGTGCTTGATCACACTGTTGTTGCAATCAAGGCCCTGAAACCAGACATATCCCAAGGGGAGAGGCAGTTTCAACAAGAGATTAATGTTTTGAGCACAATAAGACATCCAAACATGGTTCAACTTCTAGGTGCCTGTCCAGAGTACGGATGCCTTGTATATGAGTACATTGAAAATGGAAGCTTAGAAGATCGGCTTTTCCAAAAAGATAACACTCCAGCAATTCCATGGAAAGTTCGATTCAAAATAGCATCAGAAATTGGCACTGGCCTTCTTTTCCTTCACCAAACAAAGCCTGAGCCGGTTGTGCATCGTGATCTAAAACCAGCAAACATTCTATTGGACCGGAACTATGCGAGCAAGATAACTGATGTGGGTTTGGCAAGGCTAGTTCCTCCTAGTGTACCCAACAAAACCACTCAATACCACAAGACAACAGCAGCTGGTACAATTTGCTACATTGACCCCGAATATCAACAAACGGGACTATTGGGTGTGAAATCAGATATATATTCATTAGGTGTAGTGCTGCTACAGATTATCACTGGAAAGTCTCCTTTGGGTGTGGCACACCTAGTTCAGGAGGCTATAGACAAAGCTGAATTCCCAGAGGTGCTTGATCCAAATGTCACTGATTGGCCCCTTGAAGAGACTCTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAAATGAAAAAACGGGATAGACCAGACCTTGCTTCTGTCATTTTGCCACATCTTAATAGACTCCGAAATCTGTGA | 1926 | 0.4164 | MGSNNNAEEIKSTVIGIDSDRNSPHAVKWTVEHLLKKNSSCTLIHVTTNNKNLLYPHDSELVPKQGRPPTEKELQQFFLPFRGFCARKGIVAKELVLHHIDVSKALTDYIVDNSINNIVVGASRWNALIRKFKDVDVATSLVRSVPESCTVHVISKGKVCVKSVKYGVSQGSNNDGASPQLSDESCSSQNSSNRSSLFGYQLTETSSHENQDAVQNSISYTCRSKSEKRSQVSNWPCLVILLKSLEIEKRKLEQERKTKKCNSTRRETTSAKQKAMKHGKFMQEDDVVKAWLAEEATLTLAEVERKKTKAAMESAEMSRCLAEMKSQKGKQSEIRVMHEEEERNRALNASAHNKILFKRYNIKEIEVATNYFDNALKIGEGGYGPVFKGVLDHTVVAIKALKPDISQGERQFQQEINVLSTIRHPNMVQLLGACPEYGCLVYEYIENGSLEDRLFQKDNTPAIPWKVRFKIASEIGTGLLFLHQTKPEPVVHRDLKPANILLDRNYASKITDVGLARLVPPSVPNKTTQYHKTTAAGTICYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKSPLGVAHLVQEAIDKAEFPEVLDPNVTDWPLEETLSYARLALKCCEMKKRDRPDLASVILPHLNRLRNL | 641 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g1336 | 641 | Coils | Coil | 242 | 262 | - | - | |
Aed1g1336 | 641 | MobiDBLite | consensus disorder prediction | 257 | 278 | - | - | |
Aed1g1336 | 641 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 11 | 146 | - | - | |
Aed1g1336 | 641 | Pfam | Protein kinase domain | 376 | 629 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed1g1336 | 641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 445 | 641 | - | - | |
Aed1g1336 | 641 | PANTHER | OS02G0152300 PROTEIN | 12 | 641 | - | - | |
Aed1g1336 | 641 | Pfam | Universal stress protein family | 12 | 151 | IPR006016 | - | |
Aed1g1336 | 641 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 12 | 641 | - | - | |
Aed1g1336 | 641 | SUPERFAMILY | Protein kinase-like (PK-like) | 354 | 631 | IPR011009 | - | |
Aed1g1336 | 641 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
Aed1g1336 | 641 | Gene3D | Phosphorylase Kinase; domain 1 | 349 | 444 | - | - | |
Aed1g1336 | 641 | Gene3D | HUPs | 1 | 157 | IPR014729 | - | |
Aed1g1336 | 641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 490 | 502 | IPR008271 | GO:0004672|GO:0006468 | |
Aed1g1336 | 641 | SMART | serkin_6 | 372 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed1g1336 | 641 | CDD | STK_N | 12 | 157 | - | - | |
Aed1g1336 | 641 | Coils | Coil | 293 | 313 | - | - | |
Aed1g1336 | 641 | ProSiteProfiles | Protein kinase domain profile. | 372 | 635 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g1336 | Aed-Chr1 | 12454550 | 12457209 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g1336 | 246 | 641 | Receptor kinase-like Gene Family | AT5G12000 | 58.794 | 3.13e-163 | 479 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Aed1g1336 | Pkinase | 4.3e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g1336 | - | - | gmx:100814365 | 935.25 |