Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1317 ATGCCGAAGCAAATTCATGAGATTAAGGACTTCCTCCTCACTGCAAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGAGAAGCAAAGATGTGGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTCTACACCCTCTGTGTGTTTGACTCTGAGAAGGCTAATAAGTTGAAGCAATCACTTCCTCCAGGTTTAAGCGTGCAGGATGTTTGA 210 0.4571 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKANKLKQSLPPGLSVQDV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1317 69 Pfam Ribosomal L38e protein family 2 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aed1g1317 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
Aed1g1317 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aed1g1317 69 Gene3D - 1 69 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1317 Aed-Chr1 12351700 12353019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1317 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.754 1.47e-43 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1317 K02923 - gmx:100806030 137.502