Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1313 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTCCCACCTCCATCGGGACGTTATTCTGGTTACTCACCCACCGGAAGTGTTTTTAATGTGAAATCTGAGCCATCCCCTTCCTCTTCGACAACGTCGTATCCGCCACTGGCTCCAGGAACCACCAGCTCGGAGTCTAGTGGTTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCGAGAAACAGAGGTCATAGGCGTGCTCATTCGGAGATTCTCACATTACCGGATGATATTAGCTTCGACAGTGAGCTTGGTGTTGTTGGAGTTGGTGATGGGCCTTCGTTTTCGGATGACGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCATCGTCTGCGACCTCCACCTTTCAAATGGGTGAGCCGTCTAATGCTATAGGGGGAACACTGGCTTCAACACCGGTGTCAGGGGCACCCACCTCTTCTGCAGATAATGTTGTTATTGGGACTAATGAAAGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGACGGGTCAACCACCATCAAGCCTGAGATGCTGGTCTCCGGTTCGGAAGACATGTCTGCCGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGAAAGATGCGATACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAATGGCTTAAATTCGGAGAATAGTGAACTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAATGATGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACCGGGCAAGCTATGCCACCTAATGGAGGACCTATGATGAACTTTTCTTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTTTAGCTGCACAGCAGTTTCAACAGCTCCAAATTCATCCTCAGAAGCAGCAGCAGCATCAGTTTCAGCAACAACAAATGCTGCAGCAGCATCAGCAGCGGGAACAGCAGCACCAACAATCAAGTGACTTGAAAATGAAAGAAGCTACACCTACTCCATGCCCCAAAGACAATGCTTCATCAGATGTAAATCCTTCTGGGGCCAAGGATTGCTGA 1260 0.473 MDKDKSLGHGGGFPPPSGRYSGYSPTGSVFNVKSEPSPSSSTTSYPPLAPGTTSSESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSELGVVGVGDGPSFSDDAEEDLLSMYLDMDKFNSSSATSTFQMGEPSNAIGGTLASTPVSGAPTSSADNVVIGTNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGPMMNFSSFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQQQMLQQHQQREQQHQQSSDLKMKEATPTPCPKDNASSDVNPSGAKDC 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1313 419 Pfam bZIP transcription factor 223 281 IPR004827 GO:0003700|GO:0006355
Aed1g1313 419 MobiDBLite consensus disorder prediction 360 395 - -
Aed1g1313 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 284 IPR004827 GO:0003700|GO:0006355
Aed1g1313 419 MobiDBLite consensus disorder prediction 360 419 - -
Aed1g1313 419 CDD bZIP_plant_RF2 224 273 IPR044759 GO:0003700|GO:0006355
Aed1g1313 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 411 - -
Aed1g1313 419 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Aed1g1313 419 MobiDBLite consensus disorder prediction 1 83 - -
Aed1g1313 419 Gene3D - 222 275 - -
Aed1g1313 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 411 - -
Aed1g1313 419 MobiDBLite consensus disorder prediction 68 83 - -
Aed1g1313 419 SUPERFAMILY Leucine zipper domain 223 274 IPR046347 GO:0003700|GO:0006355
Aed1g1313 419 Coils Coil 239 308 - -
Aed1g1313 419 MobiDBLite consensus disorder prediction 21 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1313 Aed-Chr1 12318971 12323383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1313 19 352 bZIP Transcription Factor Family AT1G06070 74.184 1.95e-172 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g1313 bZIP_1 4.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1313 - - gmx:100786738 652.899