Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1291 ATGGATCCAGAAAGATCATTAGAGGACCAATTCTCCAAACTACACCCTTCCATGCCTGTAAACACCAGAATTGGAATAGTGGGTGCTGGTCCAAGTGGTTTATCAGCTGCTTATGCACTAACCAGACTTGGTTATAATAATATCACAGTTTTAGATAAACATCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCTGTCATCTTTCACTTGGCAAAAGAGACAGGCTCTCCACTAGAAGAATTGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTTTGGAAAATACCAAGATGTTAAAGTTGCTGATGATTATGTATCTGAAAAGGTCAAGAATTCTGGTCGTTTTGGAGTTCATGGTCTCAGTGAAGTTGCTTCAGACTTAGCTCCAGATTATGTTGAGCATCATGGACTCAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCATACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAGGTGTTGGCAATCAAGCGAAACTCTGGCAGTGTCACTGTTAATGTCAAGGGCTCAAATGAAATTGATACTATGGAATTTGATAAGATCATAATCTCGGGTAACTTTCCATTAAAATATGGAAGAACCTATAGATCAGTGCCTTCAACTTTCTTAGAAGTAATGGATGTGAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACCAATGACTACTACACAACAGTTTTAAAGATCAAAGGGCTGGAACATATGCCGGTTGGATTTTATTATTTCAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAATTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCGACTGTGACTGAGCTTTCAATCAAATCAACAGAATCCATGGGTGGAGAAGTTGAGAATTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGCTCAAGGAATACTTATTATGTTGGCGGGCTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAATAGCAGTGATTTGCCAGTGTTCCCTTACACTAAGAGTTTGTTTCCTTTGCAAACTGAGCTCCAGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCTGGAGTGAAATTTTCCAATTTGCCTACTTTGAATAGCTATTTAAAGCTCTGGGGAACTCATCCAGTCACTCAAAATAGAACTCTTTATACTTGGCTAAATGAGGGAGGGACAGTGGCTGGCAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCGGTTATCAAGCCGGGTGACAGGGTTCTCCTTGTCTATGTTCCTGGCCTAGATTTCGTCGATGCCTTCTTTGGATGCTTAAGAGCTAAAGTTTTACCAGTTCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGCGGAATAGTGGCAATTTTATCAACAGTTGGTTATCACTCAGCAGTACGTGCAGGTCTAGTGAAAAGTTTTATCTCATTAACTGGAAATAATGGGAAATACACAGCTCAATGGCCAAAACTTCCGTGGCTGCATACTGATACTTGGATCAATAACACGAGAAATTTGTCGGTGGAAGATGTAGATGATCAATGTGAATCCCAGCCTGGTGATGTATGTTTCTTGCAGTTTACCTCAGGCTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTGAAGTTGATGAAAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTGCTGTTTTCACCATTGACATTTATTAAGAAACCACTCTTATGGCTTGAAACCATCAGCAATTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGCTGGTGGTTCGGAGGTTAGAGTCTGAGAAAGACAAGCTTCAGAAATTAAACCTTTCATCCATGATTTTCCTTATGGTTGCTGCTGAGCCAGTGAGGATGAAGACCTTGAAAAGATTTCTTGATCTAACCACTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTGAGTTGTGCATTTGGAGAAAGATGTCCTATTCTTGTTGATTGGCAAGGAAGAGTTTGCTGTGGATATATTCACCCAGGTGATGCAGATGTTGACATTACAATAGTTGATCCAGAGAGTGGTGAAGAGCTTGAGGAAGATGGAAGGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCATAACCATCCTGGACGCAACTACACAAGAACTGGAGACTTGGGAAGAATTATAGATGGTAAGCTATTCATCACTGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCTGAATTTATTCGTCCTGGATGCTGTGCAGTCATTGGTGTCCCAGAGGAAATTTTATCATCAAAGGGCATTGCCTTGCCAGATGGATCTGACCAAATTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAATCAGTTAGCAAAGATGTGGTTGAGCACATTCAGACTCGCGTGGTTGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAGTGTCTCAAACAGTTTGCAGATGAAACACTGAACTTGGTGCCACAGCCTATTTTGACAAAGAAAACACTAGTAAGGTCATTTACTACAGGAACATGCAGAGAAGGAAGAACACCCCGGGCACATCTGGTGAGAGGTAACACGCCTCAATCTATTCCAAGAATCAGCAACAAGGAAATTCTGGAACACTTGAAAAAGCTTATTTCTGAGCAGTCTGGAATCCCAGTCAACAATATCTCAGTCACAGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACACAAAAACTCTCAGATTTCTTGGGGGTGCCAGTTGCAGCTATAGATGTTTTCACTGCATCAAGCATTCAAGAATTGGCTAACTTCTCAGAGAATCTTTTACTCAAGTCTCAACCTCAACTTATGAGCATTTCATCACATGCTCTGGAAGATGAAATTGACTCTATTGAAGTGGATGTGGATGTGTCCAAATCTCGCCAATGGGGTATCCGCTTACTTCAACTCCTAGCACTTATTTATATCTCTATCATGCTGCTCTCTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGTCAGTGAATCAGTATATGGAATGCCTTGGACAAACTATCTGATTTCCTTGACTTTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCCTTTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCTCTTACTCCCGATATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCACTCTATAAAACTCAGGAGATTTCTTCAAAAGTTCTAGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAAAATTGGATCCTTAGTTTTGCTTGACACTGTGGATATCACTGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGCCGTTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTTTCCTTCCTATTAGGATAGGTAAAAATTCTTCAATTGGACCGTATTCTTTTATTCAAAAAGGAAGTGTTATCAAAGAAGGATCTGAAGTACATCCCCTGCAAAAGGTTGAAGGAGGCCAACATGTTCTCAAACCTGCTAAGCTTAATAACGTTAAAGAGAATGTAGTGTTGCTTGTTACTACCAGCAAAACTCAGTCTAATACGGTGTACCATTTTCTGGGAATCTATCTCACTGGCTTTCTCAGCTCCCTTGCTGCAGCTATTGCTTACATTCTGTACATAAGGTTCTTCCAGACACCTGCATCATTCCAACACTTCTCATTTATGTGCATATGTGGGGCATTCCACTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTACCATTTCATTTACCAGCGCATACCTGCTTCATGGCCTCATACTCACCTCTCTCACCTGTGCTTTGACCCGTTTGCTGAAATTGAATCAAAACCAAACCCATTTTAAAACCTGGCTTAGACATCAATTAACCATTTCTTGCCATCATAGATTTGCAAAACTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAACACTGTTCCATTAGAGCCGTCAACCCAGTTTCAAACCCTGAGTTAATGTCAATAGGTGATGGTGTCCATCTTGGTGACTTTAGCAAGATAATCACCGGTTTTCACTATTCCAGTGGATATGCTTGTGGAAAAATAGAGGTGCATGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAATTGCTCCAATGAATTCTATCCTCCATGAGGGTAGCGTGTATATTGGATCTCAAACTCGAGTTGCAACCAGAAACTCTTCATATGATTTAGATGAAAGGATAGAAGAGATGGACACGGAGTACAAAAAAGTAGTTGCAAACATGGCTGCAAATTTAGCTGTCACGACTATTAATGTCAAAGCAAGATACTTTCACCGCATTGGCGTTAGTGGAAAGGGACACTTGAAAATCTATGACAAACTTGATGGTATCCCACTGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATCATGGTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCAAGGATTGATGCACGTGGTGCATCTTTGAGGATTCTTTCTGATGCACCAGATTCTAACCATGTTCCCCTCATTGACCTGACACTTAAAACTGGCAACGCATTTTATGCTCGCACTCTTGCTGATTTTGCAACCTGGCTTGTGTGTGGACTTCCTGCGAGGGAGGAACTTGTTAAGCGCGCCCCACATGTTCGTAAAGCAGTGTGGAACTCCCTTAGACATGCAAACTCATATGCTGAATTGCACTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTAAAGTTTAAGCTAAGACCTATTGACACAAGCATAAGTGAGGACACAGGTAAGGTTGTGCCAACCGGGATTCTTCCACCAGAAACAGGTGCAATTCCTAGGGATGAAAAGGATACACGTCCTTTACTTTTCCTTGCCGAAGATTTTCAACGGCGAGTGAATTCCCCTGGTGGAGTTCGTTATGTGTTCCAAGTTCAACTTCGAGCAGTGGCGAAAGATGAAGCCACACGTGACATTGCACTAGACTGCACCAAACCATGGGATGAAAATGAGTTCCCTTGCATTGATGTTGGAGAGATAAACATCAATGAGAATCTCTCTAGGGAAGAATCAGATAGGCTTGAATTCAACCCCTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATCAGATTTGCCAGCACGTGCGTAATAGTCAGCCACTCCCAGAATCGTGGAGGAACCTCGTAGAGCAATCTAACGTTAAGGTGGATTTGTCTTGCTGTCCCGTGGCAGCATCATTGCCCAAAAAGGAGACAAAAAAAGTGATAACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCAGCACTTTTCACTCAACCGTTGTTGCAAACGGTTTTACCTTACACGGTGGTGGGCTTGGCCGTTTATGCTCCTTTGAACTTTGTTGTTAATCTGAAGAACGTTGAGAAACTCCCGGTGCAATGGTTGCTTCCTTTGTTTTGGGTTGTCTCGGGTGTAATGGGTGCACTGGCATGTGTTGTGGCCAAATGGGTTCTCGTGGGAAGGAAGAAAGACGGTGAGACCGTAGCCATATGGAGCAAAAGGGTGATGATGGATAGCACGTGGCAAGCGATTAGAAGCTTGGTTGGGGAGTATTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGTTGATGGGTGCGGAGATAGACATGGATGGTGGTGGGGCTTACGTGGACAGCGCAGGGGCATTGTTGAACCCCGAGATGCTGAAGATTGAGAGAGGGGGTTCTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTCAAGTTTGGAGAAATCAAAATCGGTGAATATGGCTTTGTTGGGAGTAGAGCTGTGGTCATGCCTGGTGTGCATGTGGAGAATGAGGCCAATCTCTCTGCCTTGTCTCTCGCCATGAAAGGAGAAATAGTTAGGTCAAGAAATACTTAA 6945 0.4222 MDPERSLEDQFSKLHPSMPVNTRIGIVGAGPSGLSAAYALTRLGYNNITVLDKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSPLEELDSHKLAVIDSSFGKYQDVKVADDYVSEKVKNSGRFGVHGLSEVASDLAPDYVEHHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVLAIKRNSGSVTVNVKGSNEIDTMEFDKIIISGNFPLKYGRTYRSVPSTFLEVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELSIKSTESMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANSSDLPVFPYTKSLFPLQTELQKKEPKELGELPGVKFSNLPTLNSYLKLWGTHPVTQNRTLYTWLNEGGTVAGKRTYGEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFVDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVGYHSAVRAGLVKSFISLTGNNGKYTAQWPKLPWLHTDTWINNTRNLSVEDVDDQCESQPGDVCFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPLTFIKKPLLWLETISNYQATHSAGPNFAFELVVRRLESEKDKLQKLNLSSMIFLMVAAEPVRMKTLKRFLDLTTPFGLSQKVMAPGYGLAENCVFVSCAFGERCPILVDWQGRVCCGYIHPGDADVDITIVDPESGEELEEDGREGEIWISSPSAGIGYWGKEELSQKTFRNELHNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFIRPGCCAVIGVPEEILSSKGIALPDGSDQIGLVVVAEVRDGKSVSKDVVEHIQTRVVEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPILTKKTLVRSFTTGTCREGRTPRAHLVRGNTPQSIPRISNKEILEHLKKLISEQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASSIQELANFSENLLLKSQPQLMSISSHALEDEIDSIEVDVDVSKSRQWGIRLLQLLALIYISIMLLSPAYLSITAFQSFIPNVSESVYGMPWTNYLISLTLAPLSWILCMVSTCICISFFGNSFLRPNYALTPDISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGAKIGSLVLLDTVDITDPSLVSIGDEVAVAEGVLVQSHEVKNGILSFLPIRIGKNSSIGPYSFIQKGSVIKEGSEVHPLQKVEGGQHVLKPAKLNNVKENVVLLVTTSKTQSNTVYHFLGIYLTGFLSSLAAAIAYILYIRFFQTPASFQHFSFMCICGAFHWIPFTIVAYATMFSDVPSNPIAFTISFTSAYLLHGLILTSLTCALTRLLKLNQNQTHFKTWLRHQLTISCHHRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAVNPVSNPELMSIGDGVHLGDFSKIITGFHYSSGYACGKIEVHDNSVVGSQSLILPGSVVEKNVILGALSIAPMNSILHEGSVYIGSQTRVATRNSSYDLDERIEEMDTEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLDGIPLHKIFHPGKSYPIMVRHSNSLSADDDARIDARGASLRILSDAPDSNHVPLIDLTLKTGNAFYARTLADFATWLVCGLPAREELVKRAPHVRKAVWNSLRHANSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDTSISEDTGKVVPTGILPPETGAIPRDEKDTRPLLFLAEDFQRRVNSPGGVRYVFQVQLRAVAKDEATRDIALDCTKPWDENEFPCIDVGEININENLSREESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYQICQHVRNSQPLPESWRNLVEQSNVKVDLSCCPVAASLPKKETKKVITTLTLTRTWYQTFSALFTQPLLQTVLPYTVVGLAVYAPLNFVVNLKNVEKLPVQWLLPLFWVVSGVMGALACVVAKWVLVGRKKDGETVAIWSKRVMMDSTWQAIRSLVGEYFMDMASGSFLFVMWMKLMGAEIDMDGGGAYVDSAGALLNPEMLKIERGGSVGREALLFGHIYEGDEGGMVKFGEIKIGEYGFVGSRAVVMPGVHVENEANLSALSLAMKGEIVRSRNT 2314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1291 2314 SMART Phosphopantetheine attachment site 1112 1183 IPR020806 GO:0031177
Aed1g1291 2314 PANTHER AMINE OXIDASE 1 2312 - -
Aed1g1291 2314 PRINTS Adrenodoxin reductase family signature 23 45 - -
Aed1g1291 2314 PRINTS Adrenodoxin reductase family signature 47 60 - -
Aed1g1291 2314 Gene3D - 94 193 - -
Aed1g1291 2314 Pfam AMP-binding enzyme 511 945 IPR000873 -
Aed1g1291 2314 SUPERFAMILY Trimeric LpxA-like enzymes 2222 2306 IPR011004 -
Aed1g1291 2314 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Aed1g1291 2314 Gene3D Hexapeptide repeat proteins 1560 1700 - -
Aed1g1291 2314 SUPERFAMILY Heme-dependent catalase-like 1729 2046 IPR020835 GO:0020037
Aed1g1291 2314 Pfam Flavin containing amine oxidoreductase 182 256 IPR002937 GO:0016491
Aed1g1291 2314 Gene3D - 23 433 IPR036188 -
Aed1g1291 2314 SUPERFAMILY ACP-like 1106 1188 IPR036736 -
Aed1g1291 2314 Gene3D Hexapeptide repeat proteins 1346 1457 - -
Aed1g1291 2314 Gene3D Catalase core domain 1701 2054 - -
Aed1g1291 2314 PANTHER AMP-BINDING ENZYME 1 2312 - -
Aed1g1291 2314 ProSitePatterns Phosphopantetheine attachment site. 1138 1153 IPR006162 -
Aed1g1291 2314 SUPERFAMILY Acetyl-CoA synthetase-like 493 1069 - -
Aed1g1291 2314 Gene3D - 940 1073 IPR045851 -
Aed1g1291 2314 SUPERFAMILY FAD/NAD(P)-binding domain 18 262 IPR036188 -
Aed1g1291 2314 ProSiteProfiles catalase family profile. 1672 2314 IPR018028 GO:0004096|GO:0006979|GO:0020037
Aed1g1291 2314 ProSitePatterns Putative AMP-binding domain signature. 667 678 IPR020845 -
Aed1g1291 2314 Gene3D - 290 383 - -
Aed1g1291 2314 Gene3D - 1099 1182 IPR036736 -
Aed1g1291 2314 SUPERFAMILY Trimeric LpxA-like enzymes 1343 1421 IPR011004 -
Aed1g1291 2314 Gene3D - 472 939 IPR042099 -
Aed1g1291 2314 ProSiteProfiles Carrier protein (CP) domain profile. 1109 1183 IPR009081 -
Aed1g1291 2314 CDD FAAL 496 1059 IPR040097 GO:0008610
Aed1g1291 2314 Pfam Phosphopantetheine attachment site 1115 1178 IPR009081 -
Aed1g1291 2314 SUPERFAMILY Trimeric LpxA-like enzymes 1582 1716 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1291 Aed-Chr1 12154135 12162006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1291 663 978 Monolignol Biosynthesis Gene Families AT1G20480 27.129 2.39e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1291 - - cam:101501314 3780.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1291 1 12154135 12162006 Aed1g1291 1 12154135 12162006 ECH