Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1282 ATGGAAGCTGGACAAGGGTTCCGTCAGGTTCTTGGAGACATTGGTAATCTGGAGGTGCCTAGAATCACTGAAGGGAAATTGATTTCAAGGCCAATTACAAGGTTCTCAAATTTTCTTGTTGCTCTTCAGTTTCTTGCTTTGTGTCTTGCTGTTATGAACTTTCATGCAAAACTGTTGGCAAATGAACAAACTGAAGAAGTGTTAGAAGTTAGAGATTTAACTCACAAGCCACCAAATCCTGAACCTGGAGAAAGGGATAATTTTATTTGTGATAGAGGATCAAGGGAAAGATCTGGTAGGAATGTCAAGACACTGACTTCAGAAATTACTGCACAGAGCAAGGAAGCTTGTGGAGTATTGGTTGAAGCTGCGGATGAGCCTGTTGACATTGATGATGCAGATGATCCTAGTGAACTGGCAGCAGCTGAATACCTTGACGACATATACACATTCTTTAAGCTGACTGAAATGGAGACTAAGTATCGAGTTTCAGATTACATGAAAAAACAGAATGAAATTGATGAGATGATGAGATCCATTACAGTGGACTGGCTGGTTGAAACCCACATGAGATTTCAATTAATGCCCGAGACCCTCTTTCTTACCGTAAATATAATTGATCGATACCTCTCATCAACAATTGTGCCTAAACAAGAATTGCAGCTGTTGGGCATTAGCTCAATGCTCATAGCTTGCAAATATGAAGAGATACTCTCTCCTATGGTTAAAGACTTCATTATCATATCAAATAATGCATACTCCAGAAACCAGATCCTTTCCATGGAGAAAGCAATTCTCGAGAGGTTAGAATGGAATTTGACTGTTCCTACACCTTATGTCTTCTTAGTTAGACTCATCAGAACTTTTGGTGTACCACCAGATCAGCAGCTGGAAAACATGGCATTTTTCTTAGCAGAACTTGGCCTTGTGAATTATGAATCCGCAAACTTGTTTCTCCCTTCAATGAATGCCGCTGCAGCTGTCTATGCCGCTCGCTCCACACTCAATAGGAAACCGTTATGGAATGATATCCTAAGCCACATGACTGGTTACACCACACAACAATTAAGGAATTGTGCGAAGCTTCTAATAAGGTTACACTCAAGTGTTCTTGAGAGTAATCAGAAAGCAGTTTATCAGAAATTTTGCACTCTAGACACAGGAGGAGTTGCATTTTTGTCACCACCGAAGGATATTGAAAAACACTTTTAG 1212 0.4018 MEAGQGFRQVLGDIGNLEVPRITEGKLISRPITRFSNFLVALQFLALCLAVMNFHAKLLANEQTEEVLEVRDLTHKPPNPEPGERDNFICDRGSRERSGRNVKTLTSEITAQSKEACGVLVEAADEPVDIDDADDPSELAAAEYLDDIYTFFKLTEMETKYRVSDYMKKQNEIDEMMRSITVDWLVETHMRFQLMPETLFLTVNIIDRYLSSTIVPKQELQLLGISSMLIACKYEEILSPMVKDFIIISNNAYSRNQILSMEKAILERLEWNLTVPTPYVFLVRLIRTFGVPPDQQLENMAFFLAELGLVNYESANLFLPSMNAAAAVYAARSTLNRKPLWNDILSHMTGYTTQQLRNCAKLLIRLHSSVLESNQKAVYQKFCTLDTGGVAFLSPPKDIEKHF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1282 403 Pfam Cyclin, N-terminal domain 147 274 IPR006671 -
Aed1g1282 403 MobiDBLite consensus disorder prediction 72 103 - -
Aed1g1282 403 Gene3D - 147 390 - -
Aed1g1282 403 SMART Cyclin_C_2 276 396 IPR004367 -
Aed1g1282 403 Pfam Cyclin, C-terminal domain 276 395 IPR004367 -
Aed1g1282 403 Gene3D - 163 274 - -
Aed1g1282 403 SMART cyclin_7 280 365 IPR013763 -
Aed1g1282 403 SMART cyclin_7 183 267 IPR013763 -
Aed1g1282 403 CDD CYCLIN 274 363 IPR013763 -
Aed1g1282 403 PANTHER CYCLIN-B1-4 8 397 - -
Aed1g1282 403 CDD CYCLIN 177 266 IPR013763 -
Aed1g1282 403 SUPERFAMILY Cyclin-like 139 273 IPR036915 -
Aed1g1282 403 MobiDBLite consensus disorder prediction 72 102 - -
Aed1g1282 403 PANTHER CYCLINS 8 397 IPR039361 -
Aed1g1282 403 SUPERFAMILY Cyclin-like 275 398 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1282 Aed-Chr1 12090374 12092160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1282 3 393 Core Cell Cycle Gene Families AT2G26760 43.038 4.60e-101 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1282 K21777 - jre:109013760 372.089