Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1273 ATGGCGGAGGAGGAGCTGAACCTGGAGAAGCTGAAACCAGTGAAAGTGTTAGGCAAAGGAGCCATGGGCACCGTGTTCCTGGTTCAATTACAAAACTCCTCCTGCCACGTGGCACTCAAAGTCGTAGACGTAGACAAATCAACCTCCCTCCACACCCGCGCCCGCTGGGAAATCAACGTCCTCTCTCGCTTATCCCACCCCTTCCTCCCATCCTTATTGGGCTCATTCGAGTCCGATAACTTAATGGGCTGGGCCGTCCCTTACTGCCCCGGCGGCGACCTCAACGTCCTCCGTTACCGCCAAACGGATCACGTCTTCTCCCCCGCCGTCATCCGCTTCTACGTCGCCGAGATCCTCTGCGCGCTCGAACACCTCCATTCCATGGCCATCGCCTACCGTGACCTCAAACCCGAAAACGTCCTCATCCAGCAATCCGGACACGTCACCCTCACCGACTTCGACCTCTCCCGAACCCTCTCTCCCAAAAAAATCATTCACAACAACGCTGTTCTTCTCTCCCGCGAAGATACCACCCCACGAAAACACCACCGCAACTTCCGCTGGGTCCCACTCCACCACGCTAGCAAAAAGAACCCCAAGCCCGCACGAGTCAGTCCGGTGAATCGACGCAAACTGAGTTTCGAACGCTCCAACTCGTTCGTCGGCACCGAGGAATACATCGCACCGGAGGTTCTCCGCGGGGAGGGGCACGAGTTTGCCGTTGACTGGTGGGCCCTCGGAGTTCTCACCTACGAGATGCTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACGTTCCGTAACGTGATGTTGAAGGAGCCACAGTTTGTGGGGAAGAAAACGGCGTTGACGGACCTCATCATGGGGTTGCTCGAAAAGGATCCCAACAAACGTTTAGGTTATGTTAGAGGTGCTAGCGAGATCAAGGAGCACAAGTTCTTCAGAGGGGTCAAGTGGGACCTACTGACGGAGGTTCTGCGCCCGCCGTTTATTCCGTCAAGAGACGACGCAACAACCATAACCAAGTCTTCCACTGCTGGACTTGACATAAGGGGATACTTCCAGAGCTTGAAATCCCCGCCCTCTTTGCCCCCTTCGCCGTTGCGGTCACCGTCCTTTGACTTTCAGAAAAATGCTTCGTTACCGGAATTTTGA 1164 0.555 MAEEELNLEKLKPVKVLGKGAMGTVFLVQLQNSSCHVALKVVDVDKSTSLHTRARWEINVLSRLSHPFLPSLLGSFESDNLMGWAVPYCPGGDLNVLRYRQTDHVFSPAVIRFYVAEILCALEHLHSMAIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPKKIIHNNAVLLSREDTTPRKHHRNFRWVPLHHASKKNPKPARVSPVNRRKLSFERSNSFVGTEEYIAPEVLRGEGHEFAVDWWALGVLTYEMLYGTTPFKGKNRKETFRNVMLKEPQFVGKKTALTDLIMGLLEKDPNKRLGYVRGASEIKEHKFFRGVKWDLLTEVLRPPFIPSRDDATTITKSSTAGLDIRGYFQSLKSPPSLPPSPLRSPSFDFQKNASLPEF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1273 387 SMART serkin_6 11 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1273 387 ProSiteProfiles Protein kinase domain profile. 11 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1273 387 Gene3D Transferase(Phosphotransferase) domain 1 93 163 - -
Aed1g1273 387 Gene3D Phosphorylase Kinase; domain 1 12 92 - -
Aed1g1273 387 Gene3D Transferase(Phosphotransferase) domain 1 213 336 - -
Aed1g1273 387 SUPERFAMILY Protein kinase-like (PK-like) 9 374 IPR011009 -
Aed1g1273 387 MobiDBLite consensus disorder prediction 372 387 - -
Aed1g1273 387 PANTHER FLIPPASE KINASE 1-RELATED 6 364 - -
Aed1g1273 387 MobiDBLite consensus disorder prediction 362 387 - -
Aed1g1273 387 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 6 364 - -
Aed1g1273 387 Pfam Protein kinase domain 14 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1273 387 Pfam Protein kinase domain 217 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1273 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aed1g1273 387 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1273 Aed-Chr1 12047361 12048524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1273 4 387 AGC Kinase Gene Family AT3G20830 60.697 3.30e-156 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed1g1273 Pkinase 2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1273 - K08286 gmx:100802613 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1273 1 12047361 12048524 Aed1g1273 1 12047361 12048524 ECH