Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1269 ATGAAAATAATTTTGACTCAAGCAAATAACAACAGAGAAACCAGGAGAAAGAATGGGAACGAAGGTGAGAAGAAGGACTCTTGGGTTGGCTTCACTGAGTTCACCTTGGATCAACTGAGAAGTGCCACGTCAGCATTTTCACCAGACAACATAGTTTCAGAACACGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAGGATTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAGGCAGTGGGGCAGCTGAGGAATGAGCGGCTGGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTTCTGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAGAGCCAGCCAATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTGTATCATGATCTTAATGCTTACAGAGTTTTGTTTGATCAGGATGGAAACGCTAGGCTCTCTTGTTTTGGACTCATGAAAAACAGCAGAGATGGCAAAAGCTATAGTACAAATTTAGCCTTCACCCCACCTGAGTATTTGAGGACAGGAAGAATCACCCAAGAAAGTGTAATCTACAGTTTTGGCACACTCTTGCTTGGTCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCACTTGACCTAATACGAGGCAAAAACTTTCTGATGCTGGTGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAGATAGTGAGATTAGCTTCACGTTGTTTGCAGTATGAGCCTCGCGAGAGACCAAACGCCAAGTCACTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCGGTTCCATCACAAGTTCTGTTGGGCATACCAGATGAGAGTGCCCCATCAAAGGAAGCAGTTCCATTGACACCTTTTGGGGAAGCTTGTTCTAGAAGAGATCTCACTTCAATATATGAAATTTTGGAAACGGTGGGGTACAAGAATGATGAAGATGTAGCGAATGAGTTCTTATCACTAACATTTCCTTCCTTTGCAACACAGCTTTCCTTCCAAGTGTGGACAGATCAAATACAAGAAACACTTAATTCTAAGAAGCAAGGAGATTCTGCTTTCCATGCCAGAGATTTCTCTAAGGCCATTGAGTGCTATACACAATTCATCGATGGCGGAACGATGGTATCGCCAACAGTGTATGCAAGGCGCTGCTTTTGTTACCTGAAGAAGAACATGGTACAAGAAGCACTGGGAGATGCAATGCAAGCTCAATCAGTATCCCCCACATGGCCAATTGCATTCTATCTTCAAGCACTCGCCCTCTTCAGCCTTGGGATGGACCATGATGCAGAGGAAAGTCTTAAAGAAGGCACAACACTGGAAACCAGAAAACATACAAATTGA 1440 0.4403 MKIILTQANNNRETRRKNGNEGEKKDSWVGFTEFTLDQLRSATSAFSPDNIVSEHGEKAPNVVYKGRIEDDRLVAVKRFNKAVGQLRNERLANLVGCCCEGEERLLVSEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNARLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITQESVIYSFGTLLLGLLSGKHIPPSHALDLIRGKNFLMLVDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVPSQVLLGIPDESAPSKEAVPLTPFGEACSRRDLTSIYEILETVGYKNDEDVANEFLSLTFPSFATQLSFQVWTDQIQETLNSKKQGDSAFHARDFSKAIECYTQFIDGGTMVSPTVYARRCFCYLKKNMVQEALGDAMQAQSVSPTWPIAFYLQALALFSLGMDHDAEESLKEGTTLETRKHTN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1269 479 SUPERFAMILY Protein kinase-like (PK-like) 27 292 IPR011009 -
Aed1g1269 479 Gene3D Phosphorylase Kinase; domain 1 20 110 - -
Aed1g1269 479 Gene3D Tetratricopeptide repeat domain 372 479 IPR011990 GO:0005515
Aed1g1269 479 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 478 IPR045845 GO:0004672|GO:0009742
Aed1g1269 479 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 478 - -
Aed1g1269 479 Pfam Protein tyrosine and serine/threonine kinase 81 286 IPR001245 GO:0004672|GO:0006468
Aed1g1269 479 SUPERFAMILY TPR-like 376 475 IPR011990 GO:0005515
Aed1g1269 479 Gene3D Transferase(Phosphotransferase) domain 1 112 304 - -
Aed1g1269 479 ProSiteProfiles Protein kinase domain profile. 1 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1269 479 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1269 Aed-Chr1 12031528 12035555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1269 6 286 Glycoside Hydrolase AT3G07070 31.385 1.35e-35 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aed1g1269 PK_Tyr_Ser-Thr 8.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1269 - - gmx:100804210 834.713