Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed1g1269 | ATGAAAATAATTTTGACTCAAGCAAATAACAACAGAGAAACCAGGAGAAAGAATGGGAACGAAGGTGAGAAGAAGGACTCTTGGGTTGGCTTCACTGAGTTCACCTTGGATCAACTGAGAAGTGCCACGTCAGCATTTTCACCAGACAACATAGTTTCAGAACACGGTGAGAAGGCTCCCAATGTTGTCTACAAAGGAAGGATTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAGGCAGTGGGGCAGCTGAGGAATGAGCGGCTGGCTAACTTGGTTGGGTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTTCTGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAGAGCCAGCCAATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTGTATCATGATCTTAATGCTTACAGAGTTTTGTTTGATCAGGATGGAAACGCTAGGCTCTCTTGTTTTGGACTCATGAAAAACAGCAGAGATGGCAAAAGCTATAGTACAAATTTAGCCTTCACCCCACCTGAGTATTTGAGGACAGGAAGAATCACCCAAGAAAGTGTAATCTACAGTTTTGGCACACTCTTGCTTGGTCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCACTTGACCTAATACGAGGCAAAAACTTTCTGATGCTGGTGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACTGAGATAGTGAGATTAGCTTCACGTTGTTTGCAGTATGAGCCTCGCGAGAGACCAAACGCCAAGTCACTTGTGACTGCTCTAACTCCTCTTCAGAAAGAAACTTCGGTTCCATCACAAGTTCTGTTGGGCATACCAGATGAGAGTGCCCCATCAAAGGAAGCAGTTCCATTGACACCTTTTGGGGAAGCTTGTTCTAGAAGAGATCTCACTTCAATATATGAAATTTTGGAAACGGTGGGGTACAAGAATGATGAAGATGTAGCGAATGAGTTCTTATCACTAACATTTCCTTCCTTTGCAACACAGCTTTCCTTCCAAGTGTGGACAGATCAAATACAAGAAACACTTAATTCTAAGAAGCAAGGAGATTCTGCTTTCCATGCCAGAGATTTCTCTAAGGCCATTGAGTGCTATACACAATTCATCGATGGCGGAACGATGGTATCGCCAACAGTGTATGCAAGGCGCTGCTTTTGTTACCTGAAGAAGAACATGGTACAAGAAGCACTGGGAGATGCAATGCAAGCTCAATCAGTATCCCCCACATGGCCAATTGCATTCTATCTTCAAGCACTCGCCCTCTTCAGCCTTGGGATGGACCATGATGCAGAGGAAAGTCTTAAAGAAGGCACAACACTGGAAACCAGAAAACATACAAATTGA | 1440 | 0.4403 | MKIILTQANNNRETRRKNGNEGEKKDSWVGFTEFTLDQLRSATSAFSPDNIVSEHGEKAPNVVYKGRIEDDRLVAVKRFNKAVGQLRNERLANLVGCCCEGEERLLVSEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNARLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITQESVIYSFGTLLLGLLSGKHIPPSHALDLIRGKNFLMLVDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVPSQVLLGIPDESAPSKEAVPLTPFGEACSRRDLTSIYEILETVGYKNDEDVANEFLSLTFPSFATQLSFQVWTDQIQETLNSKKQGDSAFHARDFSKAIECYTQFIDGGTMVSPTVYARRCFCYLKKNMVQEALGDAMQAQSVSPTWPIAFYLQALALFSLGMDHDAEESLKEGTTLETRKHTN | 479 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed1g1269 | 479 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 292 | IPR011009 | - | |
Aed1g1269 | 479 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 110 | - | - | |
Aed1g1269 | 479 | Gene3D | Tetratricopeptide repeat domain | 372 | 479 | IPR011990 | GO:0005515 | |
Aed1g1269 | 479 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 11 | 478 | IPR045845 | GO:0004672|GO:0009742 | |
Aed1g1269 | 479 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 11 | 478 | - | - | |
Aed1g1269 | 479 | Pfam | Protein tyrosine and serine/threonine kinase | 81 | 286 | IPR001245 | GO:0004672|GO:0006468 | |
Aed1g1269 | 479 | SUPERFAMILY | TPR-like | 376 | 475 | IPR011990 | GO:0005515 | |
Aed1g1269 | 479 | Gene3D | Transferase(Phosphotransferase) domain 1 | 112 | 304 | - | - | |
Aed1g1269 | 479 | ProSiteProfiles | Protein kinase domain profile. | 1 | 290 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed1g1269 | 479 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed1g1269 | Aed-Chr1 | 12031528 | 12035555 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed1g1269 | 6 | 286 | Glycoside Hydrolase | AT3G07070 | 31.385 | 1.35e-35 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Aed1g1269 | PK_Tyr_Ser-Thr | 8.5e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed1g1269 | - | - | gmx:100804210 | 834.713 |