Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1257 ATGGAGTACTCTGCGGAAGCTTTGGGAAGAGATCTTAAGAGCTTGAGGAAGTGCTACGAGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAAGGGTTGCGCAATTTTCTTGTGGAAAAGGAGGATGAAATTTTCAGGGCCCTCAAGCATGATTTGGGCAAGCATTACGTGGAGGCTTTTAGAGACGAGGTTGGAACATTAATGAAGACCTTAAACCTCGCAACCAAGTCTTTGAAAAATTGGATGGCGGGCAAAGAGGCTAAACTGCCACGAATAGCACTGCTTTCAAGTGCAGAGATAGTTCCAGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTTCCCTTTGGACTTTCCTTGGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACAGTGTGGTTCTAAAGCCTTCAGAGTTGTCACCTACTTGCTCTTCTCTTTTAGCCACTGTCCTCCCAACTTACTTGGACAATAATGCCATTAAGGTCATCCAAGGTGGACCAAAAGTGGGGGAGCTACTCTTGCAGCAAAGGTGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTGGGCCGGATTGTTATGTCTGCAGCAGCTATGCATCTGACGCCTGTGACTTTGGAGTTAGGTGGAAAATGCCCAGCACTTATTGATTCTCTTTCTTCTTCTTGGGACAAAGAGGTGGCTGTGAAGCGAATTTTGGTGGCAAAATTCGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATGTCCTTGTAGAGAAGAGTTTCAGTTCTACATTGGTGGCATTAATGAAGGATTGTATTAAGAAAATGTTTGGAGAAAACCCCAAAGAGTCCAACACTGTTGCAAGGATAGTTAATAAAAATCATTTCACTAGACTAAAGAATCTTCTCACTGAGCCAAGGGTGAAAAAATCAGTGGTTTATGGTGGTTCAATGGACGAAAGGGACTTATTTATTGAACCGACAATATTGCTGGATCCGCCACTTGATTCAGCAATCATGGCTGAGGAAATCTTTGGCCCAGTGCTTCCAATTATCACCCTGGAGAAGATTGAAGACAGTGTTGAGTTCATAAGCTCAAGGCCTAAAGCTTTAGCTATTTATGCCTTCACGAAAAACCAAACTCTGCAGAGAAGAATTGTATCTGAAACATCATCTGGAAGTATTGTATTCAACGATGCAATTCTACAATACATAGCGGATACCCTACCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAATTATCATGGAAAGTTCTCCTTCGACGCTTTCAGTCACCACAAGGCTGTGGCCAGAAGAAGTTACTTGACTGATTTTTGGTACAGGTTTCCTCCATGGACTCTTAATAAGCTCCAATTACTTGAGGTGTCTTACAATTTTGACTACCTTGGAATACTTCTAGTTCTGCTCGGCTTAAAGAAATCAAAACGGTCACTGTTTCAGGCTTGTAATAATTGA 1488 0.4301 MEYSAEALGRDLKSLRKCYESGKTKEASWRESQLKGLRNFLVEKEDEIFRALKHDLGKHYVEAFRDEVGTLMKTLNLATKSLKNWMAGKEAKLPRIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNSVVLKPSELSPTCSSLLATVLPTYLDNNAIKVIQGGPKVGELLLQQRWDKIFFTGSARVGRIVMSAAAMHLTPVTLELGGKCPALIDSLSSSWDKEVAVKRILVAKFGACAGQACIAIDYVLVEKSFSSTLVALMKDCIKKMFGENPKESNTVARIVNKNHFTRLKNLLTEPRVKKSVVYGGSMDERDLFIEPTILLDPPLDSAIMAEEIFGPVLPIITLEKIEDSVEFISSRPKALAIYAFTKNQTLQRRIVSETSSGSIVFNDAILQYIADTLPFGGVGECGFGNYHGKFSFDAFSHHKAVARRSYLTDFWYRFPPWTLNKLQLLEVSYNFDYLGILLVLLGLKKSKRSLFQACNN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1257 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Aed1g1257 495 PANTHER ALDEHYDE DEHYDROGENASE 6 492 - -
Aed1g1257 495 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
Aed1g1257 495 PIRSF ALDH 2 479 IPR012394 GO:0006081
Aed1g1257 495 PANTHER ALDEHYDE DEHYDROGENASE 6 492 IPR012394 GO:0006081
Aed1g1257 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Aed1g1257 495 Pfam Aldehyde dehydrogenase family 23 440 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1257 Aed-Chr1 11933384 11936994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1257 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 53.926 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1257 K00128 - gmx:100798020 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1257 1 11933384 11936994 Aed1g1257 1 11933384 11936994 ECH