Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1240 ATGAAGTCAACGTTCCTCATTTTGTGCCTCTTAGCCTCGTTCCTCTGTCCAATCAAGGGTCACGGAGGAAGCGATGGTTCTGATTCTGACGAGGAATCTAATAGCGAAGATTTGCATTCTCGTGGTCTGATCGTGGTGAAAATATGGTGTTTAGTTATCTTCCTTGTGAGCACTTTGGCCGGTGGGGTGTCTCCTTACTTCTACCGTTGGAACGATACTTTTCTTCTCTTGGGGACACAGTTCGCTGGTGGTGTCTTCTTGGGAACCTCTTTGATGCATTTCTTGAGCGATTCCAATGAGACCTTCAAAGACCTTACTTCTAAATCTTACCCTTTTGCCTATATGCTCGCTTCATCTGGGTACCTTCTCACCATGCTTGGTGACTGTGTTATCACTTTTGTCACCACCAATACCAAGAGGGAAGCCAAAGTGCTGGAACTCGAAGGAGGGACAACTCCCCAAGACCACTGTGCAGTAGTTGAGACAACAACAAACCCTGCATTATTGAAGACTTCTTCTTTGGGAGACACCATTCTACTCATCCTTGCACTGTGTTTCCATTCTGTTTTCGAGGGCATTGCAGTTGGAGTTGCAGGTACTAAGGCGGACGCATGGAGGAACTTATGGACAATATCCTTGCACAAGATATTTGCTGCCATTGCAATGGGAATAGCTTTGCTAAGGATGTTACCTAAGAGACCCTTTGTAACAACAGTAGCGTATTCATTGGCCTTTGCTATCTCAAGCCCCATAGGTGTGGGGATTGGCATTGCCATAGATGCCACAACACAAGGAAGCACCGCAGATTGGATGTTTGCAATAACGATGGGTATTGCTTGTGGGGTCTTTATCTATGTTGCAATCAATCATTTAATATCCAAAGGCTTCAAACCACAGAACCCCACACGTTACGACACTCCCTGGTTTAGGTTTGTCGCCGTGCTTTCTGGTGTTGCTGTTATAGCAACAGTCATGATCTGGGACTGA 987 0.458 MKSTFLILCLLASFLCPIKGHGGSDGSDSDEESNSEDLHSRGLIVVKIWCLVIFLVSTLAGGVSPYFYRWNDTFLLLGTQFAGGVFLGTSLMHFLSDSNETFKDLTSKSYPFAYMLASSGYLLTMLGDCVITFVTTNTKREAKVLELEGGTTPQDHCAVVETTTNPALLKTSSLGDTILLILALCFHSVFEGIAVGVAGTKADAWRNLWTISLHKIFAAIAMGIALLRMLPKRPFVTTVAYSLAFAISSPIGVGIGIAIDATTQGSTADWMFAITMGIACGVFIYVAINHLISKGFKPQNPTRYDTPWFRFVAVLSGVAVIATVMIWD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1240 328 PANTHER ZINC/IRON TRANSPORTER 21 327 - -
Aed1g1240 328 Pfam ZIP Zinc transporter 46 323 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed1g1240 328 PANTHER ZINC TRANSPORTER 11 21 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1240 Aed-Chr1 11839754 11840999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1240 17 328 Inorganic Solute Cotransporters AT1G55910 58.075 3.90e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1240 K14709 - gmx:100788541 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1240 1 11839754 11840999 Aed1g1240 1 11839754 11840999 ECH