Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1239 ATGGGTTCTTTGAAAATGAAAAGCAACCTCATGTCAACGACGTTCCTCGTTATTGTGTGGCTCTATCCAATAAAGGCTGATCAGGGATCAGGAGGTGGTGATGATCATTTGTATTCTGAGGGTCTGATCGTGGTGAAACTATGGTGTTTGATGATCATGTTTGTTAGCACTTTCGCAGGTGGGGTGTCTCCTTACTTCTACCGCTGGAACGACACTTTTCTTGTGTTGGGGACTCAATTCGCAGGTGGGGTTTTCTTGGGAACCTCTTTGATGCATTTCTTGAAAGATTCTGATGAGACCTTCCGAGATCTTACAACAAAAACTTACCCTTTTTCCTTTATGCTCGCTTCATCCGGATACCTTCTCACCATGCTTGGTGACTGCGTTGTGAGTTCTGTCACCACGAATAGCCAGAGCCAGCAGATGAAACCCAAAGACGTGGTGGAACTGGAAGGAGGGAAATTAACACCCAAAGAGCAAGAGCACGATGATCACTGCGCAGTGGAGACAACAAACGCTATATTATTGAAGACTTCTTCCGTGGGAGACACCATTCTACTCATCCTTGCACTGTGTTTCCATTCAGTTTTTGAGGGCATTGCCGTTGGAGTTGCAGGTACGAAGGCTTCCGCATGGAAGAACTTATGGACAATATCCCTGCACAAGATATTTGCTGCGATCGCAATGGGAATAGCTTTGCTAAGGATGTTACCTAAGAGGCCCTTGTTAACAACGGCAGCATATTCATTGGCCTTTGCGGTGTCTAGCCCCATTGGTGTTGGGATTGGCATTGCCATAGATGCCACAACACAAGGAAACACCGCAGATTGGATGTTTGCAATAACAATGGGTGTCGCTTGTGGGGTTTTCATCTATGTTGCCATCAATCATTTAATATCCAAAGGCTTCAAACACCAGCTCGGGACGAGGACGACCACCACCCGTTTTGACACCCCCTGGTTTAGGTTTCTCGCTGTGCTTCTTGGTGTAGCTGTTATAGCACTAGTTATGATCTGGGACTGA 1023 0.4633 MGSLKMKSNLMSTTFLVIVWLYPIKADQGSGGGDDHLYSEGLIVVKLWCLMIMFVSTFAGGVSPYFYRWNDTFLVLGTQFAGGVFLGTSLMHFLKDSDETFRDLTTKTYPFSFMLASSGYLLTMLGDCVVSSVTTNSQSQQMKPKDVVELEGGKLTPKEQEHDDHCAVETTNAILLKTSSVGDTILLILALCFHSVFEGIAVGVAGTKASAWKNLWTISLHKIFAAIAMGIALLRMLPKRPLLTTAAYSLAFAVSSPIGVGIGIAIDATTQGNTADWMFAITMGVACGVFIYVAINHLISKGFKHQLGTRTTTTRFDTPWFRFLAVLLGVAVIALVMIWD 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1239 340 Pfam ZIP Zinc transporter 45 336 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed1g1239 340 PANTHER ZINC TRANSPORTER 11 22 339 - -
Aed1g1239 340 PANTHER ZINC/IRON TRANSPORTER 22 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1239 Aed-Chr1 11837017 11838261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1239 27 340 Inorganic Solute Cotransporters AT1G55910 54.348 2.91e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1239 K14709 - gmx:100776614 518.464