Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1235 ATGTTTTCTACGAACTCCCTTGTGCAAAACTTGGGTGGTCCTATATCGGTATTTGCAAATCAGAAGCAAGTTGCCGAGGGGTTTGATTCAGAGTTTGATGATTCATCTTCCCCTTCTTCCGGCACAAGCTGGAGTAGAGAATCCACCAAGTACTCCAATCCCATCCTGAGATACATAAGCGACATCCTGATGGATGAGGAAGATGAGTTGGAGCGCAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAAGCTGCTGAAAAATCATTCCATGATGTCCTCACTGACTCTGATGATAACTTTGGTCCCACTGCTAGCTTTGAGAGCAACGCCAGCTACAGTAACATCACTGATAATTCATGTGAGTCTGACTTGGTCAACTCTGGTGTTGGTGAATTTGATTCTTCTTTCTTACAACTGCAAACCCCTCCTCAAGCTGAAGCTGAAGCTGCTGCTGCTGCCTATTTTCATGATGGAACCTGGAATCTCTTTCAGTCTCAGACCATGCCACTGATGGTGGAAGAGGGTTTTTCAGCTTCAGCACGAAGAGAAAAGAGAAGCTATGGGATGGATGATTATGCCGCCTCTCATGAACAAGAAGGAAGAAGAGGAAGCAAGGTTTCAGCCATCTTTTCTGACGAGTCAGAGTCACCAGAGATCTTAGATGAGGTGCTGCTTTATCAATCTGGAAGAAGTCAATCCCAATCCCTCCTTTGTGCTGCTACTGGACCATCACAAAATGTTGATTTAGGAAAGGCGACACCGCGATCACGTTCAAAGAAAGGGTCCACCAAAGCAGAAGCAGGTACAGCTGTAGATTTATGGACCCTGCTAACTCAATGTGCACAGGCTGTGGCAAGCTTTGACCAAAGGAATGCAAATGACATACTCAATCAGATTAGGCAACACTCTTCACCTTCTGGGGATGGACTTCAGCGTTTGGCTCATTACTTTGCCAATGGCCTTCAGATAAGATTGGCTGCTGGGACCCCATCATACATGCCCCTTGAAGTTGCAACTTCCGCAGATATGTTGAAAGCTTACAAACTATTTGTTACATCCTCTCCTTTGCAGAGGTTGACGAATTACTTGACTACCAAGACAATCATTAGTCTTGTGAAAAATGAGGGCAGTGTTCATGTTATTGATTTTGGCATTTGCTATGGTTTTCAGTGGCCTTGCCTTATCAAAAAGCTCTCACAAAGGCATGGTGGTCCTCCCAAGCTTCGTATAACAGGAATTGATCTTCCTCAGCCGGGTTTTCGGCCTAAAGAAAGGGTTGAGGAGACAGGGCGGCGTTTGGCAAACTACTGCAAGAAGTTCAAGGTACCTTTTGAATACAATTGTCTTGCACAGAAATGGGAGACTATAAAGCTTGCAGATCTCAAGATAGACAGGAATGAAGTAACTGCTGTTAGCTGTTTCAACCGGCTGAAGAACTTGCCTGATGAAACCGTGGAAGTGAAGTGTCCAAGAGATGCTGTATTGAAGTTGATAAGGAGGATCAATCCAAACATCTTCATCCATGGAGTGGTGAATGGCACTTATAGTGCACCCTTTTTCCTGACTCGGTTTAGGGAGGCACTTTACCACTTCTCATCACTGTTTGATATGTTTGAAGTTAATGTGGCTCGTGAAGAACCGGAAAGAGTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATAAATGTAATAGCATGTGAAGGGGCTGAGAGGGTTGAGAGACCAGAGACCTACAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGGTTCAAGCAAGTCCGTTTTGATCCTCAGTTGGTGAATGATGAAAAAGAAATGGTGAAGGGAGAATATCACAAAGATTTTGTACTGGACGAGGATGGCAAGTGGGTTTTGCTGGGGTGGAAAGGCCGTATTCTCAATGCCATTTCTGCTTGGACTCCAGCTTAA 1935 0.4512 MFSTNSLVQNLGGPISVFANQKQVAEGFDSEFDDSSSPSSGTSWSRESTKYSNPILRYISDILMDEEDELERKPCMLQECLRLQAAEKSFHDVLTDSDDNFGPTASFESNASYSNITDNSCESDLVNSGVGEFDSSFLQLQTPPQAEAEAAAAAYFHDGTWNLFQSQTMPLMVEEGFSASARREKRSYGMDDYAASHEQEGRRGSKVSAIFSDESESPEILDEVLLYQSGRSQSQSLLCAATGPSQNVDLGKATPRSRSKKGSTKAEAGTAVDLWTLLTQCAQAVASFDQRNANDILNQIRQHSSPSGDGLQRLAHYFANGLQIRLAAGTPSYMPLEVATSADMLKAYKLFVTSSPLQRLTNYLTTKTIISLVKNEGSVHVIDFGICYGFQWPCLIKKLSQRHGGPPKLRITGIDLPQPGFRPKERVEETGRRLANYCKKFKVPFEYNCLAQKWETIKLADLKIDRNEVTAVSCFNRLKNLPDETVEVKCPRDAVLKLIRRINPNIFIHGVVNGTYSAPFFLTRFREALYHFSSLFDMFEVNVAREEPERVMLEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQVRFDPQLVNDEKEMVKGEYHKDFVLDEDGKWVLLGWKGRILNAISAWTPA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1235 644 MobiDBLite consensus disorder prediction 30 48 - -
Aed1g1235 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 643 IPR005202 -
Aed1g1235 644 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 643 - -
Aed1g1235 644 MobiDBLite consensus disorder prediction 28 48 - -
Aed1g1235 644 ProSiteProfiles GRAS family profile. 265 642 IPR005202 -
Aed1g1235 644 Pfam GRAS domain family 276 642 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1235 Aed-Chr1 11811628 11813562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1235 51 643 GRAS Transcription Factor Family AT2G29060 43.840 2.80e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed1g1235 GRAS 4e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1235 - - aprc:113855970 941.799