Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1219 ATGGTAAAGGACTTGGTTTCTTCAGACCAGACCACTATTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTCAAATCCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCACAAAAGGAGAAGACATGCCACATATAATAGAAAAGCCATTTTGTATAACCAATCTGAAGACCAACAACATGGAGTTACCGAAGCAGAAGAAGCAGAATCCCTCCTGGTCGGGCAACAGGGTGAAAAATTGCATGCTGCAGGCAAAAGTTCTCCCAAAAATCGCAAAAAAGAACCACGCAATGAGAAAAAGTTTAACAACAAAAACTCCAAAGGCAGTAGAACCATGGACTACTCAAAGGAAAAACAAGCCGGTAGTGTTCTGGAGAAAGGTGGCAAGACAACAGAAGATGCCCTTAACCATGAGCCTAAGGAAACAAACAAGCATAACAGAGACATTTCCAATAAATTTGAGAAACATACTGATGTTTTTGAGTTACTTAGAGTGGAGAAGGATTTATTACTCAAATTTCTACGAGACATAGACTTCGGTGGGAAAAAGGTCCAACAAGCTTCTCTCATCAATGCAAGATTGACAAAATCTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGCCAAACATTGGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCATTTCCAATGAGAGAAAAGTTGCATGCTGGTTCTCAAGAATCAAACATGTCGGCGTCCAGTTTTGTGAAAGATGTTTCTTATGAGAAGCCAATGCCTTTAGCGAGTGATCTTGGTGTGGATAGTGCCATGAAACAAAAAGCCATAATTTCTTCAAGGCCTTCCCAGGGATCAAGTCACAAAGGGTGGAATCAAGTGGTTCTTCATCAATTTAAAGTTATAAAACAGAAGATAAAACATGCTCTCGTGGAATTCAGAAAAAGTGGTTACCAAACTACTTCTGCTGAAGCAATCCACCATAGAGCTTCACCTGAATATAGTATCATAAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGCGTGGTTCAACAATTCAAAAGGAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGGTTCCAACAAACATGATGCTCGCCTCATGCAAAGAACATCTTCTCTGAATGAATCGTTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAACAAAGACACTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGATCCACAAGAATGGGCACGCTCCAAGGTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCATTCTACAAGATGCACTTTTTGATACAAATGATATAGGGAATACAGTGGAAGCTTATAATCGTGCTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATAGACAAGTCACTTGATCATTTTAAAGAGGCTGAAGTTGTGGAAACAGTAGAAGGGAGTGTCAGAGATGTAAATCCCAGTCTTTTATCAGATAAAATTATGGAGAAAATTGATGAAGGAGTTACCTATGACCAGAAGGAGGACATGCATGAGCCAGCTGTGGGAGAAGGAAGTTTTCCCCATGATAAAGAGGAAATGAGTAATATGACTACCTATCTTAGCAAGGAGGTGATGGCAACTCTTGAAACTAGCTTTGAGAACAATAAAACCAGCCACGAAGATACAGAATTGAATTCACTAGGCTCTGCATTGGACGAATTGGAGACTGGTTTATTATCATATAAAGGAAATGTATATAATTCTGTGCCAAACTCTTCATCCGATACAGACAACACTTGCAATTTCAAATATGTGAAAAATGTTCTTGAATTTTCGGGCTTCTTGGGAAATGAGCACACTCAGATGCGATACACAGTAGACCAGCCACTAAAGCCCTCCATATACAAAGATTTGGATGCAACTTTGCACCATGAAATTGAACCCTCTGAAGAAGAAGAGACAATGAACCCTTATGATCATCAACTCCTTTTCAACTTAGTTAACGAGGTGCTGCTTGAAATATATGGAAGGTCTCCAACTTACTTCCCAAGACCATTCTCCTTCAACCCCCGCCTCCATCCAATGCCTAAAGGGAACTATCTTCTGAATGAAGTGTGGAACAGTGTTAATTCATACCTGACCTTGAGACCTGAGCTAGACCAGACACTAGATGATGTTGTGGGGCGTGATTTGGCAAAAGGAAAAGGCTGGATGGTCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAACTAGAGGAGATGATCATGGATGATTTGTTGGATGAATTTATCTTCTCATCAAGTTTCCTTCGACTACATTGA 2361 0.3986 MVKDLVSSDQTTIQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRRHATYNRKAILYNQSEDQQHGVTEAEEAESLLVGQQGEKLHAAGKSSPKNRKKEPRNEKKFNNKNSKGSRTMDYSKEKQAGSVLEKGGKTTEDALNHEPKETNKHNRDISNKFEKHTDVFELLRVEKDLLLKFLRDIDFGGKKVQQASLINARLTKSGSFPLASTSQMPNIGSRSLKHKQNEIWAFPMREKLHAGSQESNMSASSFVKDVSYEKPMPLASDLGVDSAMKQKAIISSRPSQGSSHKGWNQVVLHQFKVIKQKIKHALVEFRKSGYQTTSAEAIHHRASPEYSIIKNEEEISQSLEDGVVQQFKRSKSSNETRASDYGSNKHDARLMQRTSSLNESLDRYTQLFEKSFNKDTKWQSSKSKSLKLTNEDKIHKNGHAPRFSRSNLSMPNLETLGFILQDALFDTNDIGNTVEAYNRAHRKSVSLPLKIDKSLDHFKEAEVVETVEGSVRDVNPSLLSDKIMEKIDEGVTYDQKEDMHEPAVGEGSFPHDKEEMSNMTTYLSKEVMATLETSFENNKTSHEDTELNSLGSALDELETGLLSYKGNVYNSVPNSSSDTDNTCNFKYVKNVLEFSGFLGNEHTQMRYTVDQPLKPSIYKDLDATLHHEIEPSEEEETMNPYDHQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHPMPKGNYLLNEVWNSVNSYLTLRPELDQTLDDVVGRDLAKGKGWMVLQEEEEYVALELEEMIMDDLLDEFIFSSSFLRLH 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1219 786 PANTHER PROTEIN TRM32 1 779 IPR044257 -
Aed1g1219 786 MobiDBLite consensus disorder prediction 411 429 - -
Aed1g1219 786 MobiDBLite consensus disorder prediction 411 436 - -
Aed1g1219 786 PANTHER PROTEIN TRM32 1 779 - -
Aed1g1219 786 MobiDBLite consensus disorder prediction 84 154 - -
Aed1g1219 786 MobiDBLite consensus disorder prediction 358 380 - -
Aed1g1219 786 MobiDBLite consensus disorder prediction 90 129 - -
Aed1g1219 786 Pfam Domain of unknown function (DUF4378) 615 775 IPR025486 -
Aed1g1219 786 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1219 Aed-Chr1 11728235 11733027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1219 164 769 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.140 1.29e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1219 - - gmx:100784103 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1219 1 11728235 11733027 Aed1g1219 1 11728235 11733027 ECH