Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1192 ATGGCGATTTCTAGAATTGCGATTGGAAATTCATCGGAGTTGAACCAATCCGATGCACTTAAGGCTGCCCTTGCGGAGTTCATCTCAATGCTAATCTTTGTTTTTGCCGGGGAAGGCTCTGGCATGGCTTATAATAAGCTGACAAACAATGGTCCAGCAACACCAGCAGGGTTAGTGGCAGCGTCACTGTCACATGCCTTTGCACTTTTTGTAGCGGTTTCTGTTGGTGCAAACATATCTGGCGGTCATGTGAACCCTGCTGTGACTTTCGGTGCATTTGTCGGTGGCCACATTACTCTCTTTAGAAGCATTCTCTACTGGATTGCTCAGTTGCTCGGCTCTGTCGTTGCTTGCTTGCTCCTTAAATTTGGCACTGCGGGACTTGAAACATCTGCATTTGCACTGTCTCCTGGGGTGGAACCAGGGAACGCTCTAGTGTTTGAGATTGTCATGACTTTTGGTTTGGTATACACTGTATATGCAACTGCAGTGGATCCAAAGAAGGGTGACCTTGGGATAATTGCTCCTATTGCAATTGGTTTCATCGTTGGTGCTAACATTTTGGCGGGTGGTGCATTTGACGGTGCATCAATGAACCCTGCGGTGTCTTTTGGGCCTGCTGTCGTCAGTTGGACCTGGACTAACCACTGGGTTTATTGGGTCGGCCCATTCTCTGGTGCTGCCATTGCTGCTGTTGTCTACCAGATTTTCTTCATTACCCCAAACACTACTCATGAACAGCTCCCCGTCACAGATTATAATTAG 765 0.4771 MAISRIAIGNSSELNQSDALKAALAEFISMLIFVFAGEGSGMAYNKLTNNGPATPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLFRSILYWIAQLLGSVVACLLLKFGTAGLETSAFALSPGVEPGNALVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWVGPFSGAAIAAVVYQIFFITPNTTHEQLPVTDYN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1192 254 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Aed1g1192 254 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Aed1g1192 254 PANTHER AQUAPORIN-8 1 253 IPR034294 -
Aed1g1192 254 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 253 - -
Aed1g1192 254 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed1g1192 254 SUPERFAMILY Aquaporin-like 16 247 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1192 Aed-Chr1 11560773 11562499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1192 1 253 Major Intrinsic Protein MIP AT4G01470 79.447 3.81e-141 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1192 K09873 - gmx:547794 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1192 1 11560773 11562499 Aed1g1192 1 11560773 11562499 ECH
Aed1g1192 1 11560773 11562499 Aed5g0427 5 3017558 3018632 ECH
Aed1g1192 1 11560773 11562499 Aed5g0427 5 3017558 3018632 PCT