Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1181 ATGCCGAAAATGGGACTCAAAAACTTCCTCTTCAGAAAAACATCACCATCACAATCTCCACCCACAAGAACCTTCCCCGACTCGTTAATGGACCAAAACATTGAAGCCGCTCGCTCCATCATTTCCAAATGGGATTCTATTTCCCCTTCTAAGCAAGCCGCTCCTCTTTTCAGCAACACACGCCAAGAAGCCAAACAGTACCTTAACGCCGTCATGAGCCTGCAGTCCACCATGCACCACCTCGTCTCGCTGGATTCCTCCTCAGAGACCCTCGTCCAAGCCCAATTCCTAATGCAACTCGCCATGAAGAGACTCCAGACCGAGTTTTATCGGATATTAGCTGAAAACAGGGACAATCTGCATCCCGAATCCGTCACATCCGCCGATTTCTCCGACGACGAGTTCCGCTTCTCCGGGGTCGCCGTGGCGGACTTGAAAGCCATTGCGGAGTGCATGGTTTCCGCAGGCTACAGCAAAGAGTGCGTCAATATTTACATCTTAATGAGAAAATCGATCGTGGATGAGGCACTGTATCACTTCGGAGTGGAGAGGCTGAGCTCCTCTCAGGTTCACAAGATGGACTGGGAGCTGCTCGAGTCGAAGATTAAGTGCTGGCTCAACGCCGTCAAGATCGCCGTCGGCACTCTGTTTCGCGGCGAGAGAACGCTCTGCGACTGCGTCTTCGGTTCGCATGAGAGGAAGATCGCGGAGTCCTGTTTCGACGCTATTTGCAGAGAAGGCGCGGCGTCGCTGTTCGGATTCCCGCAAAAAGTAGCCAAGTGCAAGAAAACACCGGAGAAAATGTTCAGGATTCTCGACTTGTACGAAGCGATCTCTGAAAATCGTCAACAAATCGAGTCCATGTTCTCGTGGGAATCAACCTCCTCCATCAGAGAGCAGATAACAGCTTGTCAAGCTCAGCTCAGCGAGGCCGTTCGGACGATGCTAAAGAACTTCGAATCTGCGATTCAGAAGGAATCCTCCAAGATTCCGGTGCCTGGCGGAGAGATCCACCCGCTCACTCGCTACGTCATGAACTACATCGCGCTCCTCGCCGATTACGGTGACACGCTGGGCGAAATAGTTGCCGATTGGCCGCAAAATCCATTGCCGGAGTCTTACTACCTGAGTCCCGATCGCGAGGGAAAGAATCGTTTGTCGGAGAAAGCTGAAAGGATCGCGTGGCTGATATTAGTGCTCCTCTGCAAGCTGGATGGCAAAGTGGAACTCTACAACTACAAGGAAAAGGAGGTTGCAGTCTCTTACCAGTTTCTGGCGAATAACATGCAATACGTCGTCGTAAAGGTCCGCAACTCCAACCTAGGGTTCATTCTCGGGGAGGATTGGTTGGCAAAGCACGAAATGAAGGTGAAAGAGTACGTTTCAAAGTACGAGCGCGTGGGTCGGAAACGCTTTTCAATGAGCACATGCAATGCAAGCTCAAGCTCTGCCCGCAACCATTGCCTGCCTCACCAGCGTCTTGAAGGATGCGTTTAA 1497 0.5164 MPKMGLKNFLFRKTSPSQSPPTRTFPDSLMDQNIEAARSIISKWDSISPSKQAAPLFSNTRQEAKQYLNAVMSLQSTMHHLVSLDSSSETLVQAQFLMQLAMKRLQTEFYRILAENRDNLHPESVTSADFSDDEFRFSGVAVADLKAIAECMVSAGYSKECVNIYILMRKSIVDEALYHFGVERLSSSQVHKMDWELLESKIKCWLNAVKIAVGTLFRGERTLCDCVFGSHERKIAESCFDAICREGAASLFGFPQKVAKCKKTPEKMFRILDLYEAISENRQQIESMFSWESTSSIREQITACQAQLSEAVRTMLKNFESAIQKESSKIPVPGGEIHPLTRYVMNYIALLADYGDTLGEIVADWPQNPLPESYYLSPDREGKNRLSEKAERIAWLILVLLCKLDGKVELYNYKEKEVAVSYQFLANNMQYVVVKVRNSNLGFILGEDWLAKHEMKVKEYVSKYERVGRKRFSMSTCNASSSSARNHCLPHQRLEGCV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1181 498 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 486 IPR004140 GO:0000145|GO:0006887
Aed1g1181 498 SUPERFAMILY Cullin repeat-like 56 466 IPR016159 -
Aed1g1181 498 Gene3D Exocyst complex component Exo70 39 493 - -
Aed1g1181 498 Pfam Exo70 exocyst complex subunit 204 467 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed1g1181 498 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1181 Aed-Chr1 11486455 11487951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1181 10 468 EXO70 exocyst subunit family AT5G59730 47.984 8.53e-148 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1181 K07195 - gmx:100801773 750.355