Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1180 ATGCCGAAAATGGGACTCAAAAACTTGTTCTTCTTCAAAACATCACCACCTCCCTCTCTTCCCACAAGAACCTTCCCCGACTCGTTAATGAACGAAAACATTGAAGCCGCTCGCTCCATCATTTCCAAATGGGAACTTATTTCCCCTTCAGACCAAACTGCCCCTCTTTTCAGCAACACACGCCAGGAAGCCAAACAGTACCTTAACGCCGTCACAAGCCTGCAGTCCACCATGCACCACCTCGTCGCACTGGATTCCTCCTCAGAGACCCTCGTCCAAGCCCAATTCCTAATGCAACTCGCTATGAAGAGACTCCAGACCGAGTTCTATCGGATATTAGCGGAAATCAGGGACAATCTGCAGGAACGCGAATCCGTCACCTTCACTGATCACCGGAGCAGCAGCGTCTCCGATGACGGCACCGATTTCTCCGACGACGAGTTCCGCTTCGCCGGCGACTCAGTTTCCACGGTCTCCATGGCGGACTTGAAAGCAATTTCGGAGTGTATGATTTCCGCCGGCTACAGCAAAGAGTGCGTCAAGATTTACATCTTAATGAGAAAGTCCATGGTGGATGAGGCACTGTACAATTTTGGAGTGGAGAGGCTCAGTTTCTCTCAGGTTCAGAAAATGGAATGGAAGGTGCTAGAGTCGAAGATTAAGTCCTGGCTCAACGCTGTCAAGATCGCCGTCCGCACTCTGTTTCACGGCGAGAGAACGCTCTGCGATTACGTCTTCGGTTCGCCGGAGAGGAAGATCGCGGAGTCCTGTTTCGACGCGGTTTGCAGAGAAGGTGCGGACTCTCTGTTCGGATTCCCCGAAAAAGTGGCCAAGTGCAAGAAAACGCCGGAGAAAATGTTCAGGACTCTCGACTTGTACGAAGCGATCTCTGAAAACCGTCAACAAATTGAGTCCATCTTCTCGTCGGAATCAACCGCCTCTATCAGATCTCAAGTCACTGTTTCTCAGGCGAGACTTGGCGAGGCGGTTCGGACGATGCTAATCGACTTCGAATCCGCGATTCAGAAGGAATCTTCCAAGACTCCAGTGCCTGGCGGCGGGATCCACCCGCTAACGCGCTACGTCATGAACTACATCGCGTTCCTCACCGATTACGGCGACTCGATCGCCGAGATTGTCGCCGAATGGCCTCAAAATTCGTTGCCGGAGTCTTACTACCGCAATCCGGATTGCGAGGGAAATAATCGCTCATCGGAGATAGCTGAACGGATGGCGTGGCTGATATTAGTGCTCCTCTGTAAGCTCGACGGAAAAGCTGAACTCTACAAGGAGGTTGCACTCTCTTACCTATTTCTCGCGAATAACATGCAATACGTCGTCGTAAAGGTCCGCAACACAAACCTAGGGTTGATCCTCGGGGAGGATTGGTTGACGAAGCACGAGTTGAAGGTGAAGGAGTACGTTTCCAAGTACGAGCGTGTGGGATGGAGCAAGGTTTTTCTGTCGCTACCGGAGAATCCGACGGCGGAGGAAGCGAGTGCGATCTACGAGAGTTTCGACGTCGCATTCCATGAAGCATGCAAGGCACAATCTTCGTGGATCGTACCCGACCCGAAACTGCGAGAGGAAATAAAAGCTTCGATAGCTTCTAAACTTGTGCCAAGCTACAGTGAGTTCTTCGGAATGTATCGGGTCGGGCCAGAGAATATTAACGGGGTTGCACCCGATGAATTGGAAAATGATCTTTCTGACATTTTGTCGGGTAGTGCTTCGTCGCATTCGCATACTCCTTCTCCTCCACATCGCTTCAAACACCCGTGA 1782 0.5135 MPKMGLKNLFFFKTSPPPSLPTRTFPDSLMNENIEAARSIISKWELISPSDQTAPLFSNTRQEAKQYLNAVTSLQSTMHHLVALDSSSETLVQAQFLMQLAMKRLQTEFYRILAEIRDNLQERESVTFTDHRSSSVSDDGTDFSDDEFRFAGDSVSTVSMADLKAISECMISAGYSKECVKIYILMRKSMVDEALYNFGVERLSFSQVQKMEWKVLESKIKSWLNAVKIAVRTLFHGERTLCDYVFGSPERKIAESCFDAVCREGADSLFGFPEKVAKCKKTPEKMFRTLDLYEAISENRQQIESIFSSESTASIRSQVTVSQARLGEAVRTMLIDFESAIQKESSKTPVPGGGIHPLTRYVMNYIAFLTDYGDSIAEIVAEWPQNSLPESYYRNPDCEGNNRSSEIAERMAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRNTNLGLILGEDWLTKHELKVKEYVSKYERVGWSKVFLSLPENPTAEEASAIYESFDVAFHEACKAQSSWIVPDPKLREEIKASIASKLVPSYSEFFGMYRVGPENINGVAPDELENDLSDILSGSASSHSHTPSPPHRFKHP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1180 593 Pfam Exo70 exocyst complex subunit 221 570 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed1g1180 593 Gene3D Exocyst complex component Exo70 39 582 - -
Aed1g1180 593 MobiDBLite consensus disorder prediction 571 593 - -
Aed1g1180 593 SUPERFAMILY Cullin repeat-like 57 571 IPR016159 -
Aed1g1180 593 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 580 - -
Aed1g1180 593 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 580 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1180 Aed-Chr1 11478758 11480539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1180 11 576 EXO70 exocyst subunit family AT5G59730 49.416 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1180 K07195 - gmx:100801773 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1180 1 11478758 11480539 Aed1g1180 1 11478758 11480539 ECH