Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1156 ATGGAGAAAATGGAGCACTTCATCGACAACTTGCCGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCTGCTCATCGCGCTATCTCCTATTTAGGCGAGCTCGGTCTTCTCCAATTCCGAGACTTAAATGCTGATAAAAGCCCCTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTAATGTCGTCTTCTCTTACTGTATTGCTACCAGATATAGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAGATTGTATTACAAAAGGCATGCGGTTTTCTTGTTTCAAGTCATAACTTTGCGGTTTTAGATGAAAGAGAACTACAAGAGAATGCATATTCAAATGATGCCTATGTTGAGAAAGCATCTTTGCTTGAACAGGAAATGAGACCTCAGTCATCAAACTCGTCAGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGCTTTTTCGTGCTACGAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACAAATTATGGACCCTGTTTCGGCTGAGATGATTGAAAAAACAGTCTTCGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACCAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGTAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACGGACTTAGAGGCAACTTTGGAAGCTGGGATTAGACACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTCTGTTTGCCAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGCTGGCATAATCTTCCATCCATTGGATGTAGTGGAATCACCACCTACATATTTTAGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATAATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGTTAGGAGCATTGGTTCTTATAGCACGTGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTTTCCATTCCTTTTCACATATTTGGTGCATCGGCTTACAAATGCCGTGATAGTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATACCCGTTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCGGAATTACCTTTCCTGAACTCTATGAAGATGAAGATGTCCATTCTGTTTGGTGTTGCACATATGAACTTAGGAATTGTAATGAGTTATTTTAATGCTCATTTCTTTAGAAGCTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTATTATTAAGTGGAGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACAGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTAGCTATAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAGTTATGATATACTACTGAATACCTTTGAGGATCATGAGGCTGAGCCTGATTTTGCCAGACAACATCACGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACTCCATTGAATTTGTTTTAGGTTCAGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCATTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTGGTGGGGCTAACTGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGAGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTGACAGAGGATGACGATTGA 2469 0.4046 MEKMEHFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSSLTVLLPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHNFAVLDERELQENAYSNDAYVEKASLLEQEMRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLEAGIRHRNKALASVADHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQMQEALQRATFDSNSQAGIIFHPLDVVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSIPFHIFGASAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSMKMKMSILFGVAHMNLGIVMSYFNAHFFRSSLDIRYQFVPQMIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAIIAVPWMLFPKPFILKKLHTERFQGRSYDILLNTFEDHEAEPDFARQHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1156 822 Coils Coil 103 130 - -
Aed1g1156 822 PIRSF ATP6V0A1 12 822 IPR026028 GO:0000220|GO:0046961
Aed1g1156 822 PANTHER VACUOLAR PROTON ATPASE A1 8 822 - -
Aed1g1156 822 Pfam V-type ATPase 116kDa subunit family 40 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aed1g1156 822 PANTHER VACUOLAR PROTON ATPASES 8 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1156 Aed-Chr1 11271743 11281864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1156 4 815 Primary Pumps ATPases(2) AT2G28520 79.632 0.0 1345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1156 K02154 - gmx:100793301 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1156 1 11271743 11281864 Aed1g1156 1 11271743 11281864 ECH
Aed1g1156 1 11271743 11281864 Aed5g0471 5 3415281 3430972 PCT