Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1151 ATGGAGAATGACAGAAACGCCCCTAGTTCTTCTCCCTCATTATCTCATTACTCTTCTTCTTCCTCTCCCCAAGTTGTGATGAGCCCTTGTGCTGCTTGCAGGATTCTGAGGCGAAGATGTGCTGAGAAATGTGTATTGGCACCTTATTTCCCTCCCACTGAACCTACCAAGTTTACCACTGCACACCGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCTCAAAGAGCTGATGCAGTGGCCAGCATGGTTTATGAGGCTGGTGCAAGAATAAGAGATCCAGTGTACGGATGTGCAGGTGCAATTTGCCAGCTTCAAAAGCAAGTAAATGAACTTCAAGAACAGTTAGCAAAGGCACAAGCTGAGGCTGTAAACATGCAATTCCAACAAGCCAATCTCGTGGCTCTAATTTGCATGGAAATGGCACAAACTCCACAGGAATCACCACAACAATCTGTGGACAACTTCATTTCAAGCCCTTCCCACAGTAGTGGCTATCAAAACAATCTCAATTTCTTTGATGAGAACACCAACCTAAACTCTTTGTGGGAGCCTCTTTGGACATGA 585 0.4564 MENDRNAPSSSPSLSHYSSSSSPQVVMSPCAACRILRRRCAEKCVLAPYFPPTEPTKFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQEQLAKAQAEAVNMQFQQANLVALICMEMAQTPQESPQQSVDNFISSPSHSSGYQNNLNFFDENTNLNSLWEPLWT 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1151 194 MobiDBLite consensus disorder prediction 1 24 - -
Aed1g1151 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 17 191 - -
Aed1g1151 194 Pfam Lateral organ boundaries (LOB) domain 29 126 IPR004883 -
Aed1g1151 194 ProSiteProfiles LOB domain profile. 28 129 IPR004883 -
Aed1g1151 194 Coils Coil 108 135 - -
Aed1g1151 194 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1151 Aed-Chr1 11236567 11238374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1151 24 194 AS2 family AT1G07900 65.517 2.65e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed1g1151 LOB 6.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1151 - - gmx:100819336 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1151 1 11236567 11238374 Aed1g1151 1 11236567 11238374 ECH
Aed1g1151 1 11236567 11238374 Aed5g0477 5 3475225 3476970 ECH
Aed1g1151 1 11236567 11238374 Aed5g0477 5 3475225 3476970 PCT