Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1127 ATGGGAAGAGTCAACAACACGCAGTATGTTAATGCATTCTCTCCACATTCTACGCAGAACACAAGGCAGTTAACAATTTTGGAACTAGAGCAAGCTACACGAAATTTCAGTCATAGTAACATCATTGGTGAAGGTGGATTTGGTTTTGTATACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCTATAAAAAGGCGTCTATTTGCTCTGACACAAAATTTCTCCCTTGAGGTTAGACTTGTGGCGAAGGATATCTATTGCTTTAGGCGCGTCCAAAGGTTGAGCTTTCCACAAAATTATTCGGAGAAGAGTGATGTATACAGTTTCGGGGTCTTCTTACTAGAGGTGATTAGTGGTTGTGAAGCAAACAACAAAAGCATGTCAAACCCAGATGAAAATATAGTGTTTCAGGCAAGAAATAGCGTTGACTTGGACAACTTTGTTGACATAACGCTGAAAGATCAAGAAAAGCATGGTGCTAGACGAATGATGAAATTGGCAATGCTATGTGTGGATGATGTGAGACCATCAATGGCGCAAATTGTGCAAGAGCTGGAGCGGATTCAAAGAGAAATTGCTCCAATGTATTCTCATTCTCAATTCAGCGACGAGATTGGTGCCGTGACACTTGGGAGTGAGCTCTTTCAGTAG 651 0.4147 MGRVNNTQYVNAFSPHSTQNTRQLTILELEQATRNFSHSNIIGEGGFGFVYKGLLQDGSIVAIKRRLFALTQNFSLEVRLVAKDIYCFRRVQRLSFPQNYSEKSDVYSFGVFLLEVISGCEANNKSMSNPDENIVFQARNSVDLDNFVDITLKDQEKHGARRMMKLAMLCVDDVRPSMAQIVQELERIQREIAPMYSHSQFSDEIGAVTLGSELFQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1127 216 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 85 214 - -
Aed1g1127 216 Gene3D Phosphorylase Kinase; domain 1 3 85 - -
Aed1g1127 216 ProSitePatterns Protein kinases ATP-binding region signature. 42 64 IPR017441 GO:0005524
Aed1g1127 216 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 83 - -
Aed1g1127 216 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 1 83 - -
Aed1g1127 216 Pfam Protein tyrosine and serine/threonine kinase 98 185 IPR001245 GO:0004672|GO:0006468
Aed1g1127 216 Gene3D Transferase(Phosphotransferase) domain 1 86 205 - -
Aed1g1127 216 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 85 214 - -
Aed1g1127 216 SUPERFAMILY Protein kinase-like (PK-like) 34 194 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1127 Aed-Chr1 11076301 11077702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1127 15 65 Receptor kinase-like Gene Family AT1G11050 56.604 2.65e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Aed1g1127 PK_Tyr_Ser-Thr 1.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1127 - - gmx:100780443 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1127 1 11076301 11077702 Aed1g1127 1 11076301 11077702 ECH