Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1103 ATGTGCAAGACAAAGATGGCAACCAACGCGGCAAGTCCCACTCGCACCCCTCGATCTCGACCCACCCAAAGCCCAAGAACAGTCTCCTCAAGGCCCACGCTCAGGCCCACTTCTTCCTCCGACAGACCCTCCACCTCATTATCAAACGGCAACAACAGCACCAGCAGCGGGCCCTACAGCGGCTCCACCGGCTACCGCCTCTCCTCAGACACCTCCATCTCAAGCTTCTCCTCCCTCACCTCCCTCCGCGATACGCTTCCCGAAAACCCTCACATCTACGACTTCTCCGAAATCTGTGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCCTGCTGGCGTTGCACCCTCCGCGGCGCCGACGTCATTGTCTTCCAGCGCAAGTTCCGCCGCAAGCTCCAGACAATCCAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCTTCATCAAACTCCTCGGCGCCTCTGTCTCCGGCGACCACATCTACCTCGTCTACGCCTTCGTCAACGGCGCCAGCCTCGCCGATTGCCTCCGCAACAAAAACAACGCCCACTTCACCGTCCTCTCCACGTGGATGTCCAGAATGCAGGTCGCCACGGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTTTGAACATTAATTTCGTCCACAATCACATCAAGAGCAGCGGAATCATCGTCACGGAGCCTTCCTTCAACGCTAGGGTTTGCCATTTCGGCGCCGCCCAGCTCTGCGGCGAAATCGAACTCGAAGACCACAATTTAGGCGAAATTAGTGAAATCGAGGAGAAGTTAACATCATCGCCGGCGAGATCCAAGCAATTCGTGGGCGTGCGGGGGTACATGGCGCCAGAATTTCAAGCCTCCGGCGTGGCGACTCAGAAGTCTGATATATACTCTTTCGGAGTGGTGATGTTGGAGCTTTTGTCCGGGGAGGAGCCGTTGAAGTTCAAGTTCGACGATAAGACGCGCCAATTTGTGAGGACGTCAGTGATCGATGCGGCGATGGCCGCCGTGGACAGCGGTGAAGGTAGCGTGGAGGGGAAGCTTAGGAGGTGGGTGGATCGGAGATTGAAAGATTCTTTTCCTGTTGATGTAGCGGAAAAGTTAACACGTGTCGCGCTGGAGTGCGTACACGTGGATCCAGATAAGAGACCCAACATGGGACGCGTCGCTGGTAAGATCTCGAAGTTTTATTTGACGTCTAGGATCTGGTCAGATAGTATTAAGATGCCTGATATTACTGTTACGTTGGGACCTCGCTGA 1302 0.5599 MCKTKMATNAASPTRTPRSRPTQSPRTVSSRPTLRPTSSSDRPSTSLSNGNNSTSSGPYSGSTGYRLSSDTSISSFSSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFRRKLQTIQLQQLLSVVCRSHHVSFIKLLGASVSGDHIYLVYAFVNGASLADCLRNKNNAHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEIELEDHNLGEISEIEEKLTSSPARSKQFVGVRGYMAPEFQASGVATQKSDIYSFGVVMLELLSGEEPLKFKFDDKTRQFVRTSVIDAAMAAVDSGEGSVEGKLRRWVDRRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDITVTLGPR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1103 433 ProSiteProfiles Protein kinase domain profile. 65 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1103 433 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Aed1g1103 433 SUPERFAMILY Protein kinase-like (PK-like) 88 403 IPR011009 -
Aed1g1103 433 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 433 - -
Aed1g1103 433 MobiDBLite consensus disorder prediction 1 64 - -
Aed1g1103 433 PANTHER OS09G0572100 PROTEIN 1 433 - -
Aed1g1103 433 Pfam Protein kinase domain 137 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1103 433 Gene3D Transferase(Phosphotransferase) domain 1 178 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1103 Aed-Chr1 10887354 10888655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1103 88 421 Receptor kinase-like Gene Family AT1G51940 31.953 8.71e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed1g1103 Pkinase 1.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1103 - - gmx:100792694 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1103 1 10887354 10888655 Aed1g1103 1 10887354 10888655 ECH