Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1100 ATGGCTGAGATTGATGGTTCTCCTGGAAGCTCCATGCATGGAGTAACAGGAAGGGAACAAGCATTTGTAGCCTCAGTTGCTTCTCCAATGGTCCCAACAGACACCATGGCAAAATTTGCTCTCCCAGTAGATTCTGAACACAAGGCCAAAATTTTCAAACTCTTCTCCCTAGCCAATCCCCACATGAGAACATTCCACCTTTCGTGGATCTCATTCTTCACCTGCTTCGTCTCAACCTTCGCAGCAGCCCCTCTTGTCCCCATCATCCGCGACAACCTTAACCTCACAAAAAGCGACATCGGAAACGCCGGGGTTGCCTCGGTGTCCGGAAGCATATTCTCAAGGCTTGCAATGGGTGCAGTGTGCGACATGCTGGGTCCACGCTACGGCTGCGCCTTCCTCATCATGCTATCGGCACCAACAGTGTTCTGTATGTCGTTCGTGAAAGATGCTGCGGGGTACATAGCGGTTCGGTTCATGATAGGGTTCTCGTTGGCGACGTTCGTGTCGTGCCAGTACTGGATGAGCACGATGTTCAACAGTAAGATAATAGGGCTTGCCAATGGGACTGCTGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTCTATGAGCTTATAAGAAGAGCAGGTGCTACTCCCTTCACTGCTTGGAGGGTTGCTTTCTTTCTTCCGGGTTGGTTGCATGTCATCATGGGGATCCTTGTCCTAACTCTGGGTCAGGACTTACCTGATGGAAACCTTCGTGCCTTGCAGAACAAGGGTAATGTAGCCAAAGACAAGTTTTCCAAGGTGCTCTGGTATGCCATAACAAATTACAGGACATGGGTTTTTGCCCTCCTCTATGGATACTCAATGGGAGTTGAATTGACAACTGACAATGTCATTGCTGAGTATTTCTATGACAGATTTAATCTAAAGCTGCACACTGCTGGAGTCATTGCTGCTTCATTTGGAATGGCAAACTTAGTGGCTCGACCCTTTGGTGGATATGCTTCCGATGTTGCAGCAAGGTTGTTTGGCATGAGGGGGAGACTCTGGACCCTTTGGATCCTCCAAACCTTAGGAGGGGTTTTCTGCATCTGGCTTGGGCGTGCCAATTCTCTTCCTATTGCCATCGTGGCTATGATCCTGTTCTCCATTGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGCATCATTCCTTTCATCTCAAGAAGGTCTTTGGGGATTATATCAGGTCTCACTGGTGCAGGTGGAAACTTTGGATCTGGCTTGACCCAATTGGTTTTCTTTTCAACCTCCAAATTCTCCACTGCCACAGGTCTCTCCTTGATGGGTGTGATGATAGTGGCTTGCACTCTTCCCGTGAGTGTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTACCCCCCTCAAAAGATGTCAACAAATCCACTGAAGAATTCTATTACACTTCTGAATGGAATGAGGAGGAGAGGCAAAAGGGATTGCACCAGAAAAGTCTCAAGTTTGCTGAGAATAGTCGATCTGAGAGAGGAAAGCGTGTGGCATCAGCCCCAACACCTCCAAATGCAACTCCCATTCATGTCTAA 1593 0.489 MAEIDGSPGSSMHGVTGREQAFVASVASPMVPTDTMAKFALPVDSEHKAKIFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDMLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRVAFFLPGWLHVIMGILVLTLGQDLPDGNLRALQNKGNVAKDKFSKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGVIAASFGMANLVARPFGGYASDVAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTATGLSLMGVMIVACTLPVSVVHFPQWGSMFLPPSKDVNKSTEEFYYTSEWNEEERQKGLHQKSLKFAENSRSERGKRVASAPTPPNATPIHV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1100 530 SUPERFAMILY MFS general substrate transporter 59 458 IPR036259 -
Aed1g1100 530 Gene3D MFS general substrate transporter like domains 264 465 IPR036259 -
Aed1g1100 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 527 IPR044772 GO:0015112
Aed1g1100 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Aed1g1100 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Aed1g1100 530 CDD MFS_NRT2_like 65 456 IPR044772 GO:0015112
Aed1g1100 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 527 - -
Aed1g1100 530 MobiDBLite consensus disorder prediction 490 513 - -
Aed1g1100 530 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Aed1g1100 530 MobiDBLite consensus disorder prediction 490 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1100 Aed-Chr1 10857826 10859647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1100 1 530 Inorganic Solute Cotransporters AT5G60770 80.189 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1100 K02575 - gmx:100782969 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1100 1 10857826 10859647 Aed1g1100 1 10857826 10859647 ECH
Aed1g1100 1 10857826 10859647 Aed5g0558 5 4085913 4088454 PCT