Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1094 ATGCAGAGATCCGGTTATGGGTCCGACGGAATATACAGGTCTCTGAGACCTTCCATCGTTTTGCCAAAAAACCCAAACCTCTCTCTCGTTTCTCATCTTTTCAACAGAGTCGCTCCGTTTCCATCCAAACCTGCTCTTATCGATGCAGACTCCTCAGAAACACTTTCATTCGCGGAGCTCAAGTCGCTAACCGTTAAAGTCTCTCACGGCCTTCTCCGCCTCGGAGTCACCAAAAACGACGTCGTTCTTTTCCTCGCCCCCAACGACATCCGCTACCTCGTCTGCTTCCTCGCCGTTGCCTCCCTCGGAGCCGCCGTCACCACCGTCAACCCCGGTTACACCGCCGGCGAAGTCTCCAAACAAGCCTCCGACTCCAACCCCAAACTCGTCGTAACGGTTCCCGAACTATGGGACAAACTCGAACATTTCAAACTCCCCGCAGTCTTCCTCCGTTCTTCCCACGCGCCCTCCAATGCGACTAGCTTCGACGCGCTGGTCAAACTCGCCGGGTCGGTGAACGAGTTCCCGGATGTTACCATTAAACAGAGTGACACTGCGGCGCTGTTGTATTCTTCGGGGACGACGGGCGTGAGCAAGGGCGTGGTTCTCACGCACGGGAACTTCGTCGCGGCGTCGTTGATGATTGGGTTGGACGATGATTTGGCCGGGGTGTACCATAGTGTCTTCCTCTGCGTTTTGCCTATGTTTCATGTTTTTGGTTTGACGGTTATTTCGTACGGGCAGCTTCAGAGGGGTAGTGCGGTCGTGTCTCTGAAGAAGTTTGAGTTTGAACTGGTTTTGAAGACAATTGAGAAGTTTAAGGTGACGCATTTGTGGGTTGTGCCTCCGATTATCCTTGCTCTGGCTAAACATGGTTTGGTTGATAAGTATGATCTTTCGTCGCTGAAGCATATTGGTTCTGGCGCTGCTCCTCTTGGGAAAGACTTGATGGTGGAGTGTGCTAAACGTTTTCCTAATGCCACTGTTTCTCAGGGATATGGTATGACTGAAACTTGTGGGATTGCTTCTGTGGAGAATACGAGGATGGGGATCCGGCATAGTGGCTCCGCGGGAATGCTTGTTGCGGGAGTGGAGGCTCAAGTAGTTAGTGTGGATACGCTGAAGCCTCTCCCTCCTGGACAGTTGGGGGAGATATGGGTACGGGGTCCTAATATGATGCAAGGTTATCACAACAATCCGCAAGCCACAATATTGACTATAGATAAAAAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAACTTTTTGTTGTTGACCGTATCAAAGAACTCATCAAGTATAAAGGTTTTCAGGTTGCGCCGGCAGAACTTGAAGGGCTTCTTGTTTCTCATCCTGAAATACTTGATGCTGTTGTCATCCCATACCCCGATGCTGAAGCTGGTGAGGTTCCAGTTGCCTATGTTGTTCGTTCACCCAATAGTTCACTGACAGAGGAAGATGTTAAAAAATTTATTGCTAATCAGGTTGCGCATTTCAAAAGATTACGAAGAGTGACATTCATCAATGCTGTTCCTAAGACAGCATCGGGGAAAATTCTCCGAAGACAGCTTATTGAGAAAGTAAGATCCAAAATATGA 1614 0.4926 MQRSGYGSDGIYRSLRPSIVLPKNPNLSLVSHLFNRVAPFPSKPALIDADSSETLSFAELKSLTVKVSHGLLRLGVTKNDVVLFLAPNDIRYLVCFLAVASLGAAVTTVNPGYTAGEVSKQASDSNPKLVVTVPELWDKLEHFKLPAVFLRSSHAPSNATSFDALVKLAGSVNEFPDVTIKQSDTAALLYSSGTTGVSKGVVLTHGNFVAASLMIGLDDDLAGVYHSVFLCVLPMFHVFGLTVISYGQLQRGSAVVSLKKFEFELVLKTIEKFKVTHLWVVPPIILALAKHGLVDKYDLSSLKHIGSGAAPLGKDLMVECAKRFPNATVSQGYGMTETCGIASVENTRMGIRHSGSAGMLVAGVEAQVVSVDTLKPLPPGQLGEIWVRGPNMMQGYHNNPQATILTIDKKGWVHTGDLGYFDEDGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVKKFIANQVAHFKRLRRVTFINAVPKTASGKILRRQLIEKVRSKI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1094 537 SUPERFAMILY Acetyl-CoA synthetase-like 23 535 - -
Aed1g1094 537 CDD 4CL 21 529 - -
Aed1g1094 537 Gene3D - 9 434 IPR042099 -
Aed1g1094 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 536 - -
Aed1g1094 537 Gene3D - 435 536 IPR045851 -
Aed1g1094 537 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 536 - -
Aed1g1094 537 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Aed1g1094 537 Pfam AMP-binding enzyme C-terminal domain 448 523 IPR025110 -
Aed1g1094 537 Pfam AMP-binding enzyme 35 439 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1094 Aed-Chr1 10791253 10795323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1094 1 537 Monolignol Biosynthesis Gene Families AT4G05160 67.096 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1094 K01904 - gmx:100797843 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1094 1 10791253 10795323 Aed1g1094 1 10791253 10795323 ECH
Aed1g1094 1 10791253 10795323 Aed5g0567 5 4139338 4141866 PCT