Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1075 ATGGTACTGTGCTTTAAATTGTTGACTTTGTCTCAGTCTCAGGAACCCATGTCAGTGCCACCAGGACTGAAAGTATTGCTATCAGTTACTACATTCTTCTCTGAATGTCCCCTACACAGTGAACGTTACAGAAGGGAATGTAATATGTATTGTTTTGATTGTAGCGAGAACAAAGCATTATGCTTCAAGTGTATACAATCTGACCATAAGGATCATCGATCAATTCAGGTAAGAAAGTCATCATATCATAATGCTGTAAGAACAAATGATATTCAGAAGGATTTGGATATCAGTGAAATTCAAACGTATGTGATTAACAGCTTCAACGTTGTTTTTCTAAACAAAAGAGATTTCGACAAATCTCATACTCAAAGGAATAATAAAATTAGCAAGCCCATTTCTCATTGTGAAACATGCAGAAGAATTATCTCAGACTCTTCGTTTTTGCTCCTTGGGATGTAA 462 0.3571 MVLCFKLLTLSQSQEPMSVPPGLKVLLSVTTFFSECPLHSERYRRECNMYCFDCSENKALCFKCIQSDHKDHRSIQVRKSSYHNAVRTNDIQKDLDISEIQTYVINSFNVVFLNKRDFDKSHTQRNNKISKPISHCETCRRIISDSSFLLLGM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1075 153 Pfam PLATZ transcription factor 78 147 IPR006734 -
Aed1g1075 153 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 146 - -
Aed1g1075 153 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 146 - -
Aed1g1075 153 SUPERFAMILY B-box zinc-binding domain 35 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1075 Aed-Chr1 10647850 10648844 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed1g1075 PLATZ 3.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1075 - - ming:122072205 135.191