Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1068 ATGGTAAAACCTGACGTAATTGAGACAAGTTCCCTACTTCCCTTCTTAGTTCTTACGTTGTTTTCCCGGCAACAAGACCAACTCAAAAACCCTAATTTCCCATCTGCACCCTTAACTGAATTCAAGGCCTTCTCTCACTCCAACATTTCTCACCCGCAACCACCATTGTTCAAATCGATTCATCCTCGTCAAAATTCCCAATCTGTCTTCCTCAACTTCTTTCTTCTGTTGTCTCAGGGCGTGTTTGTGTTTGTAGGTCCTTCAATGGCGGAGGACCAGAGTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACCGAAGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGTGACACTTTCAAGAATGGGAGCTATGTGGTGCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGACACTCAAAAATCGCGATATGTTGCCTTAAAGATTCAAAAGAGTGCTCAGCATTACACTGAAGCAGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGACGGGGATCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTTGGGACCTAATGGCCAGCATGTTTGTATGGTTTTTGAATTCCTAGGGGATAATCTTCTCACGCTTATCAAGTATAGTGATTATCGAGGGGTTCCCCTTCCCATGGTCAAGGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCATCGTGAGCTTTCTATAATACACACTGATTTGAAGCCTGAGAATGTCTTGCTTCTGTCTCCAATAGATCCATCTAAGGATCCTAGAAAATCAGGTGTTCCACTTATCCTTCCAAACACAAAGGATAAGACCGTGACCAAGAATGGGACAGCAATAGCAAGTAAAAGTTTGAATGGAGATCTGACAAAGAACCAGAAAAAGAAATTGAGGAAAAAGGCTAAAAAGGCAGCTCAAGGCTGTGCTGGGAGGGAAAATGCTGAGGAAGCTGAGGAGGATTCCAAAGTACCTGATGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAATCTGGTGAAGTTAAACCTGATAGTCCTATGAGTAAAGATGAATCAACAAAGACTTCTGAAAATACAGATATTCCACAAGGAAGTCATGGTAATAGGAGAGGTAGTCGCTCTACAAGAAAGAAGTTGCTTTCAGCTGTTGATCTTAAGTGCAAACTGGTTGATTTTGGTAATGCTTGTTGGACCTATAAACAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATACTCAACCCCAGCAGATCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTACCACTGGTGATGTTCTTTTTGATCCCCATAGTGGTGACAATTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGTGGACGCTATTCCCGAGATTTTTTCAATAGATATGGTGATTTGAGGCACATCCGCCGGTTGCGTTTCTGGCCTCTTGGTAAGGTGCTGAAGGAGAAGTATGATTTCAGTGAACAAGATACAAATAACATGGTCAACTTCCTTCTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACTGCTGCACAGTGCCTTCAGCATCCATGGTTCAGTGCAGGTCCCCGTACTCTTGAGCCCTCATTAACTGCTGTGAAGCATGATGCTATTGAAGGGGAAATATCTGAAAAAACGCAGAGGGAAAATGCTGAACAGGAGGCTGTGGAAGTTGGCATGGAGAATATGACCATAGATGGAAATCCAAAGCCACTCAAAGAGTTCCAATCTATGAAGCCATCAGAATAG 1902 0.4295 MVKPDVIETSSLLPFLVLTLFSRQQDQLKNPNFPSAPLTEFKAFSHSNISHPQPPLFKSIHPRQNSQSVFLNFFLLLSQGVFVFVGPSMAEDQSEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGSYVVQSKLGWGHFSTVWLAWDTQKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHLGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPIDPSKDPRKSGVPLILPNTKDKTVTKNGTAIASKSLNGDLTKNQKKKLRKKAKKAAQGCAGRENAEEAEEDSKVPDEQDDCSNDVKPSVESGEVKPDSPMSKDESTKTSENTDIPQGSHGNRRGSRSTRKKLLSAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELTTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLGKVLKEKYDFSEQDTNNMVNFLLPLLDFVPEKRPTAAQCLQHPWFSAGPRTLEPSLTAVKHDAIEGEISEKTQRENAEQEAVEVGMENMTIDGNPKPLKEFQSMKPSE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1068 633 Gene3D Transferase(Phosphotransferase) domain 1 211 571 - -
Aed1g1068 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Aed1g1068 633 Pfam Protein kinase domain 128 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1068 633 Pfam Protein kinase domain 407 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1068 633 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 95 630 - -
Aed1g1068 633 CDD STKc_SRPK 117 570 - -
Aed1g1068 633 PANTHER SERINE KINASE-LIKE PROTEIN 95 630 - -
Aed1g1068 633 Gene3D Phosphorylase Kinase; domain 1 104 210 - -
Aed1g1068 633 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Aed1g1068 633 SUPERFAMILY Protein kinase-like (PK-like) 123 579 IPR011009 -
Aed1g1068 633 MobiDBLite consensus disorder prediction 613 633 - -
Aed1g1068 633 MobiDBLite consensus disorder prediction 269 290 - -
Aed1g1068 633 ProSiteProfiles Protein kinase domain profile. 128 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1068 633 SMART serkin_6 128 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g1068 633 MobiDBLite consensus disorder prediction 305 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1068 Aed-Chr1 10593575 10597433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1068 94 621 EF-hand Containing Proteins AT5G22840 69.925 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Aed1g1068 Pkinase 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1068 K08832 - gmx:100791829 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1068 1 10593575 10597433 Aed1g1068 1 10593575 10597433 ECH
Aed1g1068 1 10593575 10597433 Aed5g0602 5 4390304 4393971 PCT