Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1067 ATGGGCCAATGGGGGCCTGTAATCTGTTCAGGCCCAGCCCAAAAGTCATTATGGCTTCAACTATCTCATCCTCCCTGCACGGCATGCACGACCACCATAACCATAGCCATAACCGCACCTGAACTCAACCACGCTGACATGGCGTTGTCTTGGCCGCACGTGCTGCAGTTTCGTTCTCAGCCTTCGCTCGGACATGCTAACTGCGTGTTCTTCTCCGATCTAAATGAATCCCGCTCTGTAGAACTTTCCTGCAATGATTCCTTCACTCTGCTTCGCCGGTGCAAGATCTCCGGTACGTCTCTGGCGGCGCTGAAGCCTGCGAAATGCCTCAGCAGATCCACGGAGGAGAAGCAGTTGAGAGACGCCGAAAGTGCCGTATCCGACTCCGAGGAAGTTGCTGATGAACCGAATGACAAGAACCGAACTTCCGTTCCAGCAAACGGTCGTGTTGAATTGCAGAGGATTGCCACCACGTCTTCCGGCGACTCTCTCTCTCTCGGAATTCGAGAACCGGTTTATGAAGTTGTTGAAGTGAGGTCTAACGGGAAAGTATCAACTAGAAAAATCAACAGGAGACAGTTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACGAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCCATACTTCTAAATCTGGGTTCATTACGAGCAATAGCAATGCAAGATTGTGTCCTTATATTTGACAATAATCGTATAGGAGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAAAACAACAATGGAGGGCCATCGATGCCCTTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCTCTTCTCGAGGCATTGCCAAATCGGTTAACTGGTGACATATTGGAACAACTTCGTATTAGCAAACAGACTTTGGTTGAATTAGGGTCTAAGGCAGGAGCTCTCAGACAAATGCTGCTTGACCTTCTGGAGGATCCCCATGAAATACGCCGGATATGTATCATGGGAAGAAATTGCACACTTAGTAAAGGAAACAATGATATGGAATGCTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGTTCACGAAGGCTTGAGGTTAGCAGAGTAGAACTGCTTTTGCAGGTTGGAACATTCTGTGTGGCAATAGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTGGCATTTTGGCTGACAACAGCAGGGATAATTGTTGGTGGCATAATTGCTTTCTTTCTGATGTATTCCTACCTCAGAGCTAGGAAAATATTTTGA 1509 0.4632 MGQWGPVICSGPAQKSLWLQLSHPPCTACTTTITIAITAPELNHADMALSWPHVLQFRSQPSLGHANCVFFSDLNESRSVELSCNDSFTLLRRCKISGTSLAALKPAKCLSRSTEEKQLRDAESAVSDSEEVADEPNDKNRTSVPANGRVELQRIATTSSGDSLSLGIREPVYEVVEVRSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLSKGNNDMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1067 502 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 101 501 IPR039204 -
Aed1g1067 502 CDD Mrs2_Mfm1p-like 175 501 IPR039204 -
Aed1g1067 502 MobiDBLite consensus disorder prediction 115 138 - -
Aed1g1067 502 Coils Coil 291 311 - -
Aed1g1067 502 Gene3D Magnesium transport protein CorA, transmembrane region 251 433 - -
Aed1g1067 502 MobiDBLite consensus disorder prediction 115 144 - -
Aed1g1067 502 Pfam CorA-like Mg2+ transporter protein 382 491 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed1g1067 502 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 101 501 - -
Aed1g1067 502 Coils Coil 378 402 - -
Aed1g1067 502 Gene3D - 168 249 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1067 166 502 MRS2 Gene Family AT5G22830 83.383 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1067 K16075 - gmx:100808371 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1067 1 10587322 10593336 Aed1g1067 1 10587322 10593336 ECH