Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1065 ATGAAACACCCCTTTATGACACACATTATCATGTTTTTCAACAAAAGGCTTCCTTGCTTGATCTTTGTTCTGTTCACTGCAGCTGAAAATCTTGGATTTACCTCTTACCCACCAGCTTACCTCAACTTAAAGGCCAAAGGAAATAACCTCTTGAATGGTGCAAACTTTGCCTCAGCTGCTTCTGGCTACTATGATACCACAGCCAAGTTATATCATGCAATTCCATTGAGCCAGCAGCTGGAACACTACAAAGAGTGCCAGAATATATTGGTGGGAACAGTAGGGCAGTCTAATGCTTCATCAATTATATCTGGAGCTATATATCTCATCAGTGCTGGGAACAGTGACTTTATTCAGAACTATTATCTAAATCCACTGCTTTACAAGAGTTTATATGCACTTGGAGCAAGGAGGATTGGTGTGACAACATTACCTCCAATGGGTTGTCTACCTGCAGCCATCACTCTCTTTGGCTCTGATAGCAACCAATGTGTGGTTAAACTAAATAATGATTCTATTAACTTCAACAAGAAGCTAAACACCACATCTCAGAGCTTGCAAAAATCGCTTTCGGGTCTCAAATTGGTCATTCTTGATATCTACCAACCTCTTTATGACCTTGTCACTAAGCCTTCTGAAAATGGATTTTTTGAAGCAAGGAAGGCGTGTTGTGGAACAGGATTGCTAGAGACGTCTATATTGTGCAACCAGAAGTCCATAGGAACATGTGCCAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCTGAGGCTGCAAACAAGATTTTGTCTGATGACTTGTTGGCTGCTGGCATCTCTCTCATATCCTAA 837 0.4098 MKHPFMTHIIMFFNKRLPCLIFVLFTAAENLGFTSYPPAYLNLKAKGNNLLNGANFASAASGYYDTTAKLYHAIPLSQQLEHYKECQNILVGTVGQSNASSIISGAIYLISAGNSDFIQNYYLNPLLYKSLYALGARRIGVTTLPPMGCLPAAITLFGSDSNQCVVKLNNDSINFNKKLNTTSQSLQKSLSGLKLVILDIYQPLYDLVTKPSENGFFEARKACCGTGLLETSILCNQKSIGTCANASEYVFWDGFHPSEAANKILSDDLLAAGISLIS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1065 278 Gene3D SGNH hydrolase 23 274 IPR036514 -
Aed1g1065 278 CDD SGNH_plant_lipase_like 28 270 IPR035669 -
Aed1g1065 278 Pfam GDSL-like Lipase/Acylhydrolase 129 268 IPR001087 GO:0016788
Aed1g1065 278 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 26 276 - -
Aed1g1065 278 PANTHER GDSL ESTERASE/LIPASE EXL3 26 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1065 Aed-Chr1 10581674 10583642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1065 12 269 Acyl Lipid Metabolism Gene Families AT4G10950 26.429 2.77e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1065 - - gmx:100804640 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1065 1 10581674 10583642 Aed1g1065 1 10581674 10583642 ECH
Aed1g1065 1 10581674 10583642 Aed5g0604 5 4395828 4398773 PCT