Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1045 ATGAGATTGGAGAAATGCTGGTTTTGCTCTTCAACCGTATACCCTGGACATGGAATCCAGTTTGTTCGCAATGATGCAAAGATTTTTCGGTTTTGTAGATCTAAATGCCACAAGAACTTCAAAATGAAGAGAAATCCTCGTAAGGTAAAATGGACCAAGGCATATCGTCGAGTGCATGGAAAGGATATGACACAGGACTCGACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGACAGGAATGTTGCGGAGAATGTCCTCAAGGCCATTCCTAAGATTGATAAGATCAGAGTCACCAGGGAGGAGAGACACCATAAGAATAGGTCCTCTTTGACTCAACTTGTATATGTAAATCATGTATATTGGAAAGGTTTACTTGGTATTTTGTTTTGGCCTTTTGCTGACATTTTGTAA 423 0.4019 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNVAENVLKAIPKIDKIRVTREERHHKNRSSLTQLVYVNHVYWKGLLGILFWPFADIL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1045 140 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Aed1g1045 140 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Aed1g1045 140 SMART 4TRASH 6 44 IPR011017 -
Aed1g1045 140 PANTHER BNAA04G10330D PROTEIN 1 111 - -
Aed1g1045 140 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Aed1g1045 140 PANTHER 60S RIBOSOMAL PROTEIN L24 1 111 IPR000988 -
Aed1g1045 140 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Aed1g1045 140 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1045 1 111 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 83.784 1.32e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1045 K02896 - gmx:100778077 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1045 1 10455148 10456421 Aed1g1045 1 10455148 10456421 ECH