Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1043 ATGGCAGCTAGGGCACATGATGTCGGTGCCCTAGCCATTAGGGGCACCTCAGCGGTTCTAAACTTTCCAAACTCATCAACTTCTCTTCTTCCAATCGTTAACTTATTATCTAGTTCACCTAAAGATATTCGAGCAGCTGCAGTAGAAGCCGCAGAGAGTTTCAGACCAATCACGATCACCAATTCTCATCACAACAAAATTGGCCGCAAAACCAAGTGTAAGAGAGTTAAGAAGGTTCCGTCAATAGAGGAAACAACAAAGGAAACGGTGTTGGACTCTTCCTTGAACTTGAAGAGCGTGCATAATAATTTGATGGATAGTGAAAAATGTGATAATATCAACAGTACTACTACTAGCATAGAGAAAAGTAATTTGGACTTGTTGTCTTCAACAATGTTCTACGATGAGGAGGAATTGTTTAACATGCCAAGCCTCTTGGACAGAATGGCAGAGAATCTGGGAATTTTCCCATTGCTACCATCACTGGATTATTATTGGGATGATCATGCTTATTGCACAGACTTCAATTTATGGACGGATTAA 543 0.407 MAARAHDVGALAIRGTSAVLNFPNSSTSLLPIVNLLSSSPKDIRAAAVEAAESFRPITITNSHHNKIGRKTKCKRVKKVPSIEETTKETVLDSSLNLKSVHNNLMDSEKCDNINSTTTSIEKSNLDLLSSTMFYDEEELFNMPSLLDRMAENLGIFPLLPSLDYYWDDHAYCTDFNLWTD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1043 180 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 179 IPR045277 GO:0003700
Aed1g1043 180 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1043 Aed-Chr1 10441812 10442354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1043 1 179 AP2-EREBP Transcription Factor Family AT5G51990 29.121 1.91e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1043 - - gmx:100815039 262.692