Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1024 ATGGATCATGTTCAGATGCATGTTTGCATGCTGCATGCAACTGACAAAAGCTGTTGCTTGTGGCAGGTTGTTCCAAAAAGTTGCACCTTTATCAGCACACATGGATCTCCAACAGCCAAATCAAGAGGTGCCATTGCAAGAACCAGAAGGCACATTTCTCAACAGAGCAAACAAAACTCAATACTCTCACTCACCATTGATGAGTTCTATGGCAAGAATGGAAAGAGCATAGGGTCCATGAACATGGATGAATTCCTTGCCAGCATTTGGAACTCAGATGACAACCAACCTAACCTTGATGAAGCTACAAAGGGTAAAAGTGTAGCAACAGAAGCCACAATTTCCCAGCCAGGCTCAGTCTCTGTCCTTCCTTCAATTCGCAATAAAACTATCGCCAAAAAGCAACCACAGCCACAGCACAATGAAGCTAATAATAATAATAGCCTTGTCAGCAATGCGCCACTACTCAAAAGGCAACCCACAATTGGAGAAATGACTTTGGAGGAATTCCTAGTAAAAGCTGGGGTGGTGGAAGAATCATCATTACTATTCAACTCTTCATTACCTCTGAATCAGATTGGGCTTGAGCCACACAAAATGTTGCCACAGAATAACAACTTAGTTGTGGAGAAATGTCAAAGCTTAGGAGAATCAAGTGGGAAGGGTAATAAGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGCGAATCCGCAGCACGTTCTCGAGCTAGAAAACAGGCATATACGGTAGAGCTAGAACAAGAGTTCAATCAGCTAAGAGAAGTGAACAAAAAGCTCAAACAAAATCTGGTGTTGAAGCAGATTTCTCAGAGAAAGCACACAACAATGGCTCAAAAGAGGACAGAAAAATTGAAGGCAATGAAAAGGCATATGAGCGCATCCTGGTGA 945 0.4275 MDHVQMHVCMLHATDKSCCLWQVVPKSCTFISTHGSPTAKSRGAIARTRRHISQQSKQNSILSLTIDEFYGKNGKSIGSMNMDEFLASIWNSDDNQPNLDEATKGKSVATEATISQPGSVSVLPSIRNKTIAKKQPQPQHNEANNNNSLVSNAPLLKRQPTIGEMTLEEFLVKAGVVEESSLLFNSSLPLNQIGLEPHKMLPQNNNLVVEKCQSLGESSGKGNKKRIIDGPPEVVVERRQRRMLKNRESAARSRARKQAYTVELEQEFNQLREVNKKLKQNLVLKQISQRKHTTMAQKRTEKLKAMKRHMSASW 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1024 314 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 193 314 IPR043452 GO:0003700|GO:0045893
Aed1g1024 314 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 53 186 IPR043452 GO:0003700|GO:0045893
Aed1g1024 314 SMART brlzneu 234 297 IPR004827 GO:0003700|GO:0006355
Aed1g1024 314 Gene3D - 236 292 - -
Aed1g1024 314 Coils Coil 257 281 - -
Aed1g1024 314 SUPERFAMILY Leucine zipper domain 238 282 IPR046347 GO:0003700|GO:0006355
Aed1g1024 314 PANTHER BZIP TRANSCRIPTION FACTOR 193 314 - -
Aed1g1024 314 Pfam bZIP transcription factor 238 282 IPR004827 GO:0003700|GO:0006355
Aed1g1024 314 CDD bZIP_plant_BZIP46 238 290 - -
Aed1g1024 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 282 IPR004827 GO:0003700|GO:0006355
Aed1g1024 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Aed1g1024 314 MobiDBLite consensus disorder prediction 132 152 - -
Aed1g1024 314 PANTHER BZIP TRANSCRIPTION FACTOR 53 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1024 Aed-Chr1 10310256 10311931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1024 56 314 bZIP Transcription Factor Family AT3G44460 40.404 1.30e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g1024 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1024 K14432 - gmx:100799576 310.842