Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1023 ATGGTTTTGTTATGTTATGTAGCAGGAGCCGCAATGTTTGACATGGAATATGCAAGATGGTTAGAAGAAGATCACAGGCTAATGGGGGAGCTGAGAAACGGGTTGCAAGCACCGTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTTTCTCACTATGATGAGATTTTCAGGCTCAAGGGTGTGGCTGCTAAATCTGATGTTTTCCACCTTATCAATGGCTTGTGGACTTCTCAAGCTGAACGTTGCTTCCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGGTGATTCAACAGTTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGGCTGAGGCATTCCTCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAGCAGTTGCAACAGTCTCTGGTCGACACCATAGCTGGTGCCCCACTCGTTGATGGTGTCCAACAAATGGTCGTTGCCATGAGCAAGCTCGCCAATCTTGAAGGATTTCTTCGTCAGGCTGATAATTTGAGGCAACAAACCCTTCATCAGTTATGTCGATTACTAACAGTTCGTCAAGCAGCACGCTGCTTTATTGTCATTGGAGAGTACTATGGACGTCTTCGAGCACTTAGTTCTCTTTGGGCATCAAGACCACGAGACCAGACCTTGATCAGCGACGATACCTCATGCCAAACAACTACGGAAATGCAAATAGTGCAACAACATTCTCAGAATCATTTCTCAAATTTCTGA 756 0.4577 MVLLCYVAGAAMFDMEYARWLEEDHRLMGELRNGLQAPLSDSDMRVMVDGYLSHYDEIFRLKGVAAKSDVFHLINGLWTSQAERCFLWIGGFRPSDLITMVIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGAPLVDGVQQMVVAMSKLANLEGFLRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRDQTLISDDTSCQTTTEMQIVQQHSQNHFSNF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1023 251 ProSiteProfiles DOG1 domain profile. 10 218 IPR025422 GO:0006351|GO:0043565
Aed1g1023 251 Pfam Seed dormancy control 28 102 IPR025422 GO:0006351|GO:0043565
Aed1g1023 251 PANTHER TRANSCRIPTION FACTOR TGA9 8 228 - -
Aed1g1023 251 PANTHER TRANSCRIPTION FACTOR TGA9 8 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1023 Aed-Chr1 10303702 10306791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1023 7 251 bZIP Transcription Factor Family AT1G08320 72.653 1.55e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1023 K14431 - gmx:100775461 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1023 1 10303702 10306791 Aed1g1023 1 10303702 10306791 ECH
Aed1g1023 1 10303702 10306791 Aed5g0657 5 4808799 4815019 PCT