Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g1022 ATGGCAGATAATGATGCTTTTTGCTACCCTTATCATATTGATGATTGCATGCCTCTTGAGAAATGGCCCAATAAGGGGCCTCAGGATTCAGAAATGCTTCCCAGAAGAAAGGGACCTGGTTCTACATCAGAGAAACCACTTGATGCAAAGACATTGAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTTCAAAGATCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAAGTACTGTAAGCTCTGGTGAGGTTATCTGA 348 0.4397 MADNDAFCYPYHIDDCMPLEKWPNKGPQDSEMLPRRKGPGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRSRSQGLFVDCGGVGSTVSSGEVI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g1022 115 Pfam bZIP transcription factor 49 86 IPR004827 GO:0003700|GO:0006355
Aed1g1022 115 SUPERFAMILY Leucine zipper domain 50 93 IPR046347 GO:0003700|GO:0006355
Aed1g1022 115 Gene3D - 49 98 - -
Aed1g1022 115 PANTHER TRANSCRIPTION FACTOR TGA9 36 111 - -
Aed1g1022 115 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 48 92 IPR004827 GO:0003700|GO:0006355
Aed1g1022 115 Coils Coil 69 96 - -
Aed1g1022 115 PANTHER TRANSCRIPTION FACTOR TGA9 36 111 - -
Aed1g1022 115 MobiDBLite consensus disorder prediction 19 52 - -
Aed1g1022 115 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 53 68 IPR004827 GO:0003700|GO:0006355
Aed1g1022 115 SMART brlzneu 46 111 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g1022 Aed-Chr1 10302054 10302975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g1022 37 115 bZIP Transcription Factor Family AT1G08320 73.750 7.43e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed1g1022 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g1022 K14431 - gmx:100775461 123.635