Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0974 ATGGATGTTGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGCTGTACAGAACCACGCCGCCGCTGCTCCGGCGCCGGACACGACGGAGGGAGAGCAGCTAGCGGAGCCTCCGTCGTCCGAAGACGGATCTCCGGCTCAGACGCCGACGGCGGCTGCTTCGGCGCCGCAGAGTCCGGTGGTCGGACCGAGGCTGGCGCCATCTTACACTGTGGTGAATGCAATTTTGGAGAAGAAGGAGGACGGACCGGGGCCGAGATGCGGCCACACGTTGACGGCGGTGGCGTCTGTCGGAGAGGAGGGGACGCCAGGGTACATTGGTCCGAGGTTGATTTTGTTCGGTGGTGCCACTGCTCTTGAAGGCAATTCCGCGGCGTCAGGGACTCCTTCATCTGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCCAGGATAACTCCCTTTGGAGAACCTCCAACTCCGAGGGCTGCACATGTGGCGACTGCTGTAGGAACTATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCCGGGCCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCCTGGACACAGCTGCTAAGCCTTATGAATGGCGCAAGCTAGAGCCAGAAGGAGAGGGCCCGCCTCCATGCATGTATGCTTCTGTCTCCGTGAATTCTGCCTCGTATGCAACTGCAAGTGCACGTTCTGATGGACTTCTTCTGCTTTGTGGAGGCAGGGATGCCAATAGTGTTCCATTGTCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCACCAAGATATCAGCATGCAGCGGTATTCGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCACTCCAAGAACTGGTAGATACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCATGCAGCTGCTGCTATTGGTGACCTAATTTTTATTTATGGCGGTTTACGTGGGGCTGCTGATGGTTCTGTTGTTTTGGGAAATCCAGTTGCACCACCAATGAATGGTGACATTTATACTGATATCAGCACTGAAAATGCCTTGCTTCCGGGACCTCGGCGAACTGCTAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGACAGGAGAATGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCGGAAGCTACACCAAGTGGGAAAGAAACTTCCTCCTTGATCAAGCCTGATTCTGCAGGTTCAAATAACATTAATCCTGGTGGAGTTCGGCTGCATCACAGAGCTGTGCGTAATACATTTTCATTACCAGGGAAAAAAGTATTCTGTGTACAAGTTTCCATAAAATATTTAGGCCCATTTTTGGTTGTGTTGAATTTTCTCCAGGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCCTGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGGGTTGGTTACGGGACTCCAGAAAATGCAACTGCTGCCAGGAAATTATTAGATCGGCAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGGCAGTTTTTTTTAGATTGTAATGAACTTGCTGATCTTTGTGACAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTGCAACTTAGGGCACCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGACCTCATGCGCCTTTTTGACGAGTATGGTTCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTTCGTTGAAGGTTGAGTATCCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCACTGTTTGGTTTCCGAATTGAGTGCATAGAGAGGATGGGTGAGAGAGACGGAATTTGGACATGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTGGCAGCATTAATTGAGAAAAAAATTATTTGCATGCACGGTGGTATTGGCCGTTCAATTAATCATGTAGAACAGATTGAAAACATTCAGCGGCCAATTCCAATGGAAGCAGGATCAATTGTGCTTATGGATCTATTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGACTGCGACCAAATGCTAGAGGTCCAGGATTAGTTACTTTTGGGCCTGATCGGGTCATGGAATTTTGTAACAACAATGATCTTCAGCTCATCGTTCGGGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTTTCAGCGACTAATTATTGTGGTACTGCAAATAATGCTGGGGCAATATTAGTTTTGGGCAGAGACCTTGTTGTGGTTCCTAAGCTGATTCATCCATTACCACCAGCAATTTCTTCACCAGAAACGTCACCGGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGGCCACCAACACCAACCAGAGGCCGTCCCCCAGTAACAAATGACCGAGGTCCGCTGGCTTGGATATAA 2964 0.4875 MDVDSSMVPETDHDPAVQNHAAAAPAPDTTEGEQLAEPPSSEDGSPAQTPTAAASAPQSPVVGPRLAPSYTVVNAILEKKEDGPGPRCGHTLTAVASVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYASVSVNSASYATASARSDGLLLLCGGRDANSVPLSSAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVELTRRCRHAAAAIGDLIFIYGGLRGAADGSVVLGNPVAPPMNGDIYTDISTENALLPGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKETSSLIKPDSAGSNNINPGGVRLHHRAVRNTFSLPGKKVFCVQVSIKYLGPFLVVLNFLQVVVAAETGGALGGLVRQLSIDQFENEGRRVGYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNELADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLSLKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGPLAWI 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0974 987 SMART pp2a_7 656 940 IPR006186 GO:0016787
Aed1g0974 987 Pfam Calcineurin-like phosphoesterase 684 891 IPR004843 GO:0016787
Aed1g0974 987 Pfam Kelch motif 338 384 IPR011498 GO:0005515
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 684 711 IPR006186 GO:0016787
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 719 746 IPR006186 GO:0016787
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 752 776 IPR006186 GO:0016787
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 790 816 IPR006186 GO:0016787
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 880 900 IPR006186 GO:0016787
Aed1g0974 987 PRINTS Serine/threonine phosphatase family signature 902 918 IPR006186 GO:0016787
Aed1g0974 987 CDD MPP_Bsu1_C 636 938 IPR041758 -
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 571 981 - -
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 433 547 - -
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 432 - -
Aed1g0974 987 SUPERFAMILY Metallo-dependent phosphatases 641 947 IPR029052 -
Aed1g0974 987 MobiDBLite consensus disorder prediction 41 56 - -
Aed1g0974 987 MobiDBLite consensus disorder prediction 963 987 - -
Aed1g0974 987 Gene3D - 283 472 IPR015915 GO:0005515
Aed1g0974 987 MobiDBLite consensus disorder prediction 1 65 - -
Aed1g0974 987 MobiDBLite consensus disorder prediction 499 514 - -
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 571 981 - -
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 433 547 - -
Aed1g0974 987 MobiDBLite consensus disorder prediction 515 535 - -
Aed1g0974 987 Gene3D - 621 958 IPR029052 -
Aed1g0974 987 MobiDBLite consensus disorder prediction 497 538 - -
Aed1g0974 987 Pfam Galactose oxidase, central domain 222 275 - -
Aed1g0974 987 ProSitePatterns Serine/threonine specific protein phosphatases signature. 753 758 IPR006186 GO:0016787
Aed1g0974 987 Gene3D - 65 282 IPR015915 GO:0005515
Aed1g0974 987 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 432 - -
Aed1g0974 987 SUPERFAMILY Kelch motif 146 435 IPR015915 GO:0005515
Aed1g0974 987 PIRSF STPPP_BSU1 42 441 IPR012391 GO:0004721|GO:0009742
Aed1g0974 987 PIRSF STPPP_BSU1 441 987 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0974 Aed-Chr1 10010736 10025605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0974 648 883 Calmodulin-binding Proteins AT5G63870 29.779 2.47e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0974 - - gmx:100776048 1793.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0974 1 10010736 10025605 Aed1g0974 1 10010736 10025605 ECH
Aed1g0974 1 10010736 10025605 Aed5g0709 5 5266434 5280396 ECH
Aed1g0974 1 10010736 10025605 Aed5g0709 5 5266434 5280396 PCT