Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0968 ATGGGTGTCTCTGGGAAGTGGATTAAAGCATTGGTTGGTCTAAAGAAATCACAAAAGCCAGGGTCTTCTGAGAAGGGTGGAAATGTTGGCAAGTTTCACCACCAGAGAAGGCATGATGTCGAATTTGATAATGGTAAACTTCCAAACGAATTGGATAATGATGCTAGTCCACCTGTTGAAGATGATAATGGCCATACAAACCTTGATGCCCACTATTCATCTTCTTCTTCACAACAAGCACATGATGCTGCATATAATCAACAATCAAGGGAGGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGGGCTTTGAAAGGTGTGGTAAGACTTCAGGCCCTTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCTAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAACATCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGATGGATGGTGTGATACTACAGGATCTGTTGAAGAAATTCAGGCTAAAATATTGAAGAGACAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAGCAGCATGTTTCCTCTGGATTTGAACCAGATAAAAATAGCTGGGGTTGGAATTGGTTAGAGAGATGGATGGCTGTCCGTCCTTGGGAGAATCGGTTTGTTGACATTAATACGAAGGATGGAGTAACAGTCCATGAAGATGGAGCCAAGGATGATAACAATGGAACCACATCTCAGTTGAGCTCTGCTTACAAGAAACCATTCTCATCAAACACTCATCCAAACCTGGCAAATCAGGGAACTGGTCCCACTATTTCGGATGGCTGTGATTCTTCATCTAGTAAGTCTGCATCTTTGCTAGAATCATCAAACACACAGCCTGTTAAGCCAACTCCTAAGGCAAATGTCGAGAATACTGTTGAAGAAGTTAACTCAAAACCTAGAATTGGCTCAAGATCTCATAGTAATCCAAAGGAGAGAACATCGCAGACAGATAAGCAGGCCAAAAAACGATTATCACTGCCTAACAATGCAGGGGGTGGTGCTGGATCTCAAATAGTCAAACACCCAGTTAGCACTACTAATGTGAAAGGAACGCTAAGCACACAAAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGCGAATACAAAATCAGTTCCATAG 1293 0.4362 MGVSGKWIKALVGLKKSQKPGSSEKGGNVGKFHHQRRHDVEFDNGKLPNELDNDASPPVEDDNGHTNLDAHYSSSSSQQAHDAAYNQQSREEWAAICIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKHQQNLANEARVREIEDGWCDTTGSVEEIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQHVSSGFEPDKNSWGWNWLERWMAVRPWENRFVDINTKDGVTVHEDGAKDDNNGTTSQLSSAYKKPFSSNTHPNLANQGTGPTISDGCDSSSSKSASLLESSNTQPVKPTPKANVENTVEEVNSKPRIGSRSHSNPKERTSQTDKQAKKRLSLPNNAGGGAGSQIVKHPVSTTNVKGTLSTQKSSRDKPKLNGRRDANTKSVP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0968 430 Gene3D - 90 133 - -
Aed1g0968 430 SMART iq_5 113 134 IPR000048 GO:0005515
Aed1g0968 430 SMART iq_5 90 112 IPR000048 GO:0005515
Aed1g0968 430 MobiDBLite consensus disorder prediction 269 430 - -
Aed1g0968 430 MobiDBLite consensus disorder prediction 29 48 - -
Aed1g0968 430 MobiDBLite consensus disorder prediction 393 413 - -
Aed1g0968 430 PANTHER IQ-DOMAIN 5-RELATED 2 392 - -
Aed1g0968 430 MobiDBLite consensus disorder prediction 279 357 - -
Aed1g0968 430 PANTHER IQ-DOMAIN 5-RELATED 2 392 - -
Aed1g0968 430 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Aed1g0968 430 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Aed1g0968 430 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Aed1g0968 430 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Aed1g0968 430 MobiDBLite consensus disorder prediction 68 85 - -
Aed1g0968 430 MobiDBLite consensus disorder prediction 14 85 - -
Aed1g0968 430 MobiDBLite consensus disorder prediction 358 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0968 Aed-Chr1 9977693 9983432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0968 1 422 IQD Protein Family AT3G22190 54.630 2.44e-125 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0968 - - gmx:100781346 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0968 1 9977693 9983432 Aed1g0968 1 9977693 9983432 ECH