Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0967 ATGTTCGGAAGGGCACCGAAGAAAAGCGACAGCACCAGGTACTATGAAATCCTTGGTGTTTCCAAAACCGCTTCGCCCGATGATTTGAAGAAGGCTTACAAGAAAGCCGCAATTAAGAACCATCCCGACAAAGGCGGTGATCCCGAGAAGTTCAAAGAGCTTGCTCAAGCCTATGAGGTTCTGAGTGACCCTGAGAAGCGTGAGATTTATGATACTTATGGTGAAGATGCTCTTAAGGAAGGAATGGGTGGTGGTGGCGGGGGCCATGATCCATTTGATATCTTCAGTTCATTCTTTGGTGGAAGTCCTTTTTCAGGTGGTGGCAGTAGAGGACGAAGGCAGAGACGGGGAGAAGATGTGGTTCATCCCCTGAAGGTTTCTCTGGAGGATATTTACCTCGGAACATCTAAGAAACTCTCTCTTTCACGAAACGTGTTGTGCTCAAAATGCAATGGGTGTGTTGTGCAATTAGGTGTATTTGATGAGCATCCTGATACAGTCACTGGGGATATTGTCTTTGTCGTACAACAGAAGGAACATCCAAAGTTCAAAAGAAAGGCCGATGACCTTTTTGTAGAGCACACATTGTCTCTTACTGAGGCTCTATGTGGCTTCCAGTTTGTGCTGACCCACTTGGATGGCCGGCAGCTTCTGATCAAATCGAACCCTGGGGAGGTTGTTAAACCTGATTCATACAAGGCAATAAACGATGAGGGAATGCCAAACTACCAGAGGCACTTTCTGAAGGGAAAGCTGTACATTCATTTCTCAGTGGAATTTCCTGATTCACTGAGTGTTGAACAAGTGAAGGCTTTGGAGGGTGTTCTGCCATCAAAGCCTTTATCACAGTTGACAGACATGGAGCTGGATGAGTGTGAGGAAACCACACTCCTTGATGTGAACATGGAGGAAGAAACAAGGAGGAGGCAACAAGCTCAGCAGGAGGCATACGAGGAGGATGACGATATGCATGGAGGTGCTCAGAGAGTACAGTGCGCTCAGCAGTAA 1008 0.4692 MFGRAPKKSDSTRYYEILGVSKTASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDTYGEDALKEGMGGGGGGHDPFDIFSSFFGGSPFSGGGSRGRRQRRGEDVVHPLKVSLEDIYLGTSKKLSLSRNVLCSKCNGCVVQLGVFDEHPDTVTGDIVFVVQQKEHPKFKRKADDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPNYQRHFLKGKLYIHFSVEFPDSLSVEQVKALEGVLPSKPLSQLTDMELDECEETTLLDVNMEEETRRRQQAQQEAYEEDDDMHGGAQRVQCAQQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0967 335 CDD DnaJ_C 118 264 - -
Aed1g0967 335 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 158 335 IPR044713 GO:0006457|GO:0030544
Aed1g0967 335 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 153 IPR044713 GO:0006457|GO:0030544
Aed1g0967 335 CDD DnaJ 14 63 IPR001623 -
Aed1g0967 335 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 158 335 - -
Aed1g0967 335 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 7 153 - -
Aed1g0967 335 MobiDBLite consensus disorder prediction 303 335 - -
Aed1g0967 335 Gene3D - 110 178 - -
Aed1g0967 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 118 181 IPR008971 GO:0006457|GO:0051082
Aed1g0967 335 Pfam DnaJ domain 14 71 IPR001623 -
Aed1g0967 335 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Aed1g0967 335 Coils Coil 300 322 - -
Aed1g0967 335 PRINTS DnaJ domain signature 46 66 IPR001623 -
Aed1g0967 335 PRINTS DnaJ domain signature 15 33 IPR001623 -
Aed1g0967 335 PRINTS DnaJ domain signature 66 85 IPR001623 -
Aed1g0967 335 SMART dnaj_3 12 66 IPR001623 -
Aed1g0967 335 Gene3D DnaJ domain 10 109 IPR036869 -
Aed1g0967 335 Pfam DnaJ C terminal domain 121 261 IPR002939 -
Aed1g0967 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 183 272 IPR008971 GO:0006457|GO:0051082
Aed1g0967 335 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Aed1g0967 335 Gene3D - 180 262 - -
Aed1g0967 335 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Aed1g0967 335 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0967 Aed-Chr1 9970894 9973170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0967 8 73 C2H2 Transcription Factor Family AT1G74250 42.667 3.45e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0967 K09503 - gmx:100818805 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0967 1 9970894 9973170 Aed5g0713 5 5301800 5304538 PCT