Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0966 ATGATGGATCCCTTCATCCACAAGCTCCGTCGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTGTGGTGTTTTTCGTGCGGAGAATTTCGTATAAGGACGTTAGAAGAGCCACGGACGGTTTCCACAGAGTCGTTTATAGCAATTCTGAGGTTTCTGCGTACGCTGCCAAGTTTGGAGACGGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGTTTCGACGAAGGAAACGACAATTTCTACAGACACGTGCAGTTCTTGGGGCGCTTGCGTCATCGCCATCTTCTCTCGCTCAGAGGCTTTTCCGTCGGACGCAATCACAAGAGGTTGCTCATATTTGACAACATAGAAAATGGGAGCTTGAAGGATCATCTAAATGACCCTTTGAAGACTCCCTTGGATTGGAGGAGGAGGTTACATATAGCTAATGGCGTTGTGGCTGCACTGCAGGAATACTTGTTTCTCTTCAGTGACCCACCAGTGTGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAACTATCTGACTTTGGCCTTCTTACATCTGGTGGAAATTCTGTTATGGTGCCATATTCAGAAGATTTGAAGCAGAGAAGTTGTAAGATTATATTTCAACTTGGAGTGCTCATACTGGAACTGGTCACCGGACAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAGGAATCCAGATTTTACAATTCCATAGATAAGATGCTAGACCCTGATCTTGGTAACAATTATGACTGTGCGGAGCTTAAAAGTCTTCTGGGTGTGGCAAAGTTATGTATCAAATCTTGGGACAAGCCTTCATTTACAATTCCACAGTTATTCCGGCATCTCCAAAAGAAGATTGATATTAGCCATTACTAG 909 0.4477 MMDPFIHKLRRHLLAWLHRSRSGVVFFVRRISYKDVRRATDGFHRVVYSNSEVSAYAAKFGDGGGVCLVREVKGFDEGNDNFYRHVQFLGRLRHRHLLSLRGFSVGRNHKRLLIFDNIENGSLKDHLNDPLKTPLDWRRRLHIANGVVAALQEYLFLFSDPPVCHVSITSSNIMLDENFTAKLSDFGLLTSGGNSVMVPYSEDLKQRSCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMLDPDLGNNYDCAELKSLLGVAKLCIKSWDKPSFTIPQLFRHLQKKIDISHY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0966 302 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 298 - -
Aed1g0966 302 SUPERFAMILY Protein kinase-like (PK-like) 25 267 IPR011009 -
Aed1g0966 302 Pfam Protein tyrosine and serine/threonine kinase 79 191 IPR001245 GO:0004672|GO:0006468
Aed1g0966 302 Gene3D Phosphorylase Kinase; domain 1 16 116 - -
Aed1g0966 302 Gene3D Transferase(Phosphotransferase) domain 1 212 300 - -
Aed1g0966 302 Gene3D Transferase(Phosphotransferase) domain 1 118 210 - -
Aed1g0966 302 PANTHER OS01G0253100 PROTEIN 2 298 IPR045271 GO:0004714|GO:0006468
Aed1g0966 302 ProSiteProfiles Protein kinase domain profile. 33 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0966 Aed-Chr1 9966261 9969147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0966 23 301 Receptor kinase-like Gene Family AT3G19300 35.216 5.01e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Aed1g0966 PK_Tyr_Ser-Thr 7.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0966 - - gmx:100791979 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0966 1 9966261 9969147 Aed1g0966 1 9966261 9969147 ECH