Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0922 ATGGCTGACACGGATAGCTCTTCCACTGAAATTTCTACTGATTCAGGGAAGCGAGGGTCTTCCAAAGTTGAATTTTCTGAAGATGAGGAAACTCTTATCATGAGGATGTATAAACTGGTTGGGGAGAGGTGGTCTTTAATTGCTGGAAGAATTCCTGGAAGAACAGCAGAGGAGATAGAGAAGTATTGGACTTCGAGATTCACGAATTCTAGTAAATGA 219 0.4155 MADTDSSSTEISTDSGKRGSSKVEFSEDEETLIMRMYKLVGERWSLIAGRIPGRTAEEIEKYWTSRFTNSSK 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0922 72 CDD SANT 24 63 IPR001005 -
Aed1g0922 72 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 10 70 - -
Aed1g0922 72 MobiDBLite consensus disorder prediction 1 19 - -
Aed1g0922 72 MobiDBLite consensus disorder prediction 1 25 - -
Aed1g0922 72 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 71 IPR017930 -
Aed1g0922 72 Pfam Myb-like DNA-binding domain 22 64 IPR001005 -
Aed1g0922 72 Gene3D - 24 67 - -
Aed1g0922 72 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Aed1g0922 72 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 10 70 - -
Aed1g0922 72 SMART sant 21 69 IPR001005 -
Aed1g0922 72 SUPERFAMILY Homeodomain-like 22 68 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0922 Aed-Chr1 9609359 9610705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0922 17 68 MYB Transcription Factor Family AT5G14750 50.000 1.92e-15 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed1g0922 Myb_DNA-binding 2.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0922 - - gmx:100801532 121.709