Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0918 ATGGACTCCATTTGCCCTATAGGATTGCAGTGTGCCACTGAAATCTCTTCTCTTCTCTCGCCTCCGTCACCCCTTCAAGTTCAGGAGTATTATCACAACCTTTTGTCTGCAAGAGGGTGCAGTGGTATCACAGTCAAGCAGGATGGCAGCTTTGGAAAAGGCTTATTTGCAGACATGGACTTCAAAGAGGGGGAACTGGTTCTGAAGGACCCCATGTTTGTAGGGGCTCAACATTCCCTCAACAAGATTGATTGTTTGGTCTGCAGCTTCTGCTTTCGTTTTATTGGTTCCATAGAACTTCAAATTGGGAGGAGGCTTTACATACAACAACTAAGGGTCCATGGGAGTCACCGTTGTGATGAAGGAAGCTCTTCAAAACACTTCCATGAAATGGATTCTTCTGATGAAGAGGAGAGCACTCAGCAACGTATTTCTGGTAGTTCCAAAACTAAAGTTCCTCTCCCTCTAGGTGTTGTGGAATCGTTAATGAATGGTCAAATGGTGTTGCCTTTATCCGAGAAGTTCTCCTTGCCGCCGGCTGTCCAATGCTCTGGTGGATGTGGAGAAGCTTACTATTGCAGCATGTCATGTGCAGAGGCTGATTGGGAATCCTCTCATTCTTTACTCTGTACTGGTGAGAATTCTGATTCAACTCATACAGTGTCACTCCTTAAATTCATCAAACATGCTAATGAAACAAATGATATATTCCTCCTTGCTGCAAAGGCCATTTCTTCTACCATGTTAAAGTACCACAAGTTAAAAGCAGTCAGTCTTGAAGAGAAAGTGAAAGACAATACATCCTGTCTTTCAAACCACTGTAACTTATCTATTCTCTTGGAAGCTTGGAGGCCGATATCGATGGGACACAAGAGAAGGTGGTGGGACTGTATTGCTTTGCCAAACGATGTGGATTCTTCTGATGAAGCTTCATTCAGGCTGCAAATGAAAATGTTGGCATTTGAGTCTCTCCAACTTCTTAAGGCAGCCATATTTGACAAGGAATCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGCCCTATCCTAGTAAGGGAGTAGTTGAGAAATTTACGCAACCAATTCTGGATGCTCTTGGGGAAGAGTATTCTGTTTATTGCGAAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTTGTCCTAATGCCAAGGCTTTCAAAAGAGATGAGGATAAAGATGGCCAAGCAACAATAATTGCACAGAGATCCATTTGTAAAGGAGAAGAGATAACCATATCATATGTTGATGAGGACCTTCCATATGAAGAGAGACAGGCATCCCTTGCAGATTATGGTTTCAGTTGCAGGTGTCCAAAGTGCATTGAAGAAGAGCCATAA 1377 0.4277 MDSICPIGLQCATEISSLLSPPSPLQVQEYYHNLLSARGCSGITVKQDGSFGKGLFADMDFKEGELVLKDPMFVGAQHSLNKIDCLVCSFCFRFIGSIELQIGRRLYIQQLRVHGSHRCDEGSSSKHFHEMDSSDEEESTQQRISGSSKTKVPLPLGVVESLMNGQMVLPLSEKFSLPPAVQCSGGCGEAYYCSMSCAEADWESSHSLLCTGENSDSTHTVSLLKFIKHANETNDIFLLAAKAISSTMLKYHKLKAVSLEEKVKDNTSCLSNHCNLSILLEAWRPISMGHKRRWWDCIALPNDVDSSDEASFRLQMKMLAFESLQLLKAAIFDKESSPVEDYFLYIDDLPYPSKGVVEKFTQPILDALGEEYSVYCEGTAFFPLQSCMNHSCCPNAKAFKRDEDKDGQATIIAQRSICKGEEITISYVDEDLPYEERQASLADYGFSCRCPKCIEEEP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0918 458 SUPERFAMILY HIT/MYND zinc finger-like 185 211 - -
Aed1g0918 458 Gene3D - 159 215 - -
Aed1g0918 458 MobiDBLite consensus disorder prediction 117 139 - -
Aed1g0918 458 Pfam SET domain 52 427 IPR001214 GO:0005515
Aed1g0918 458 CDD SET_SMYD 367 453 - -
Aed1g0918 458 Pfam MYND finger 182 210 IPR002893 -
Aed1g0918 458 SUPERFAMILY SET domain 41 451 IPR046341 -
Aed1g0918 458 Gene3D SET domain 357 457 IPR046341 -
Aed1g0918 458 ProSiteProfiles SET domain profile. 41 428 IPR001214 GO:0005515
Aed1g0918 458 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 337 457 IPR044237 GO:0008168
Aed1g0918 458 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 337 IPR044237 GO:0008168
Aed1g0918 458 MobiDBLite consensus disorder prediction 117 149 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed1g0918 SET 5.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0918 - - gmx:100803651 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0918 1 9579725 9587055 Aed1g0918 1 9579725 9587055 ECH