Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0905 ATGGACATGAATTCCTCAGGTGGTGTCTCTGGTAATTGGCTCTATGATTATGGCTTTGATATCCCTGTTGCTGGTGATGGTGCTGACTTCATAGCTTCAGACTCTGCTGCTGCTTTCAGTTGGGGGCCTCAGAGTCACAACTTCAAGGGTCCCTCAAATATGAGCTTGGAAATGGAATACTCACTGGATTCAACTGTCCTGGAAAATGGTCCTTCAAAGCGGTTAAGGACTGAATCATGTGCATCTGGCACCAAGGCATGTCGTGAGAAATTGCGAAGGGATAAACTGAATGAGAGGCATGCTATTATTTTGCATATTGTGTTTCTGGAATTGAGTTCCATCTTGGAGCCTGGTAGGCTGCCCAAAACAGACAAAGTTGCAATATTAAGTGATGCGGCTCGAGTGGTAATCCAGTTGAGAAATGAAGCCGAGAGGATGAAGGAAATGAATGATGAATTACAGGCAAAAGTTAAAGAATTGAAGGGTGAGAAGAATGAGCTTCGAGATGAGAAGAATAGGCTGAAGGAAGAGAAAGAAAAGTTGGAGCAGCAGGTAAAAGTCGCAAATATACAACCCAACTTCCTCCCTCAAGCCCCAGCAGCTAAAGGACAAGTTGGTAGCCACAAGCTGATACCTTTCATTGGGTACCCTGGAATTGCCATGTGGCAGTTTATGCCCCCTGCTGCACTTGATACTTCAAAGGATCATCTGCTTCGACCTCCTGTTGCATAA 732 0.4495 MDMNSSGGVSGNWLYDYGFDIPVAGDGADFIASDSAAAFSWGPQSHNFKGPSNMSLEMEYSLDSTVLENGPSKRLRTESCASGTKACREKLRRDKLNERHAIILHIVFLELSSILEPGRLPKTDKVAILSDAARVVIQLRNEAERMKEMNDELQAKVKELKGEKNELRDEKNRLKEEKEKLEQQVKVANIQPNFLPQAPAAKGQVGSHKLIPFIGYPGIAMWQFMPPAALDTSKDHLLRPPVA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0905 243 CDD bHLH_AtILR3_like 85 168 - -
Aed1g0905 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 80 139 IPR011598 GO:0046983
Aed1g0905 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 154 IPR036638 GO:0046983
Aed1g0905 243 Gene3D - 84 170 IPR036638 GO:0046983
Aed1g0905 243 Coils Coil 129 191 - -
Aed1g0905 243 PANTHER BHLH TRANSCRIPTION FACTOR 8 243 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aed1g0905 243 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 8 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0905 Aed-Chr1 9515423 9517533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0905 10 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 49.796 1.18e-69 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0905 - - gmx:100806838 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0905 1 9515423 9517533 Aed1g0905 1 9515423 9517533 ECH